Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00312 ATGGCTTACTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAACCAGATGTGGCTGAGTTTATATCAGCACTAGCTGCAGGAAACAATGCACAACTGATGGTTGTGGCATGTGCTGGTGCAGCAGACTCTACCACTCTAGCATTGGTTGCTGCTGCTCATCAAACTGGGGGCCAAGTCATTTGTGTTGTCCCTGGTCATGAAGAGCTACGAGCCTCCAAAGTTGCCTTAGGAGTGGCTTCTCAGCAAGTTCAATTCTTGGTAGGAGAAGCTGAGAAGCTTCTGTTAAAGCAATGTGACCAGGCAGCAGATTTCGTGCTCATTGACTGCAACCTTGAGAACCATGAAGAGATTCTTAAAGCAGTTGAAGAGGGTAGGAAGCAAAATGGCACAGTGGTGGTTGTCGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCCTGGCATGTGGATCAAAAACACAGCTTCTTCCCATAGGAGAAGGTTTGCTAGTGACTAGATTTGGAATCAGAGAAACAAGTCCAAAGTATGGAAAAAAAATGGGAAAGGGCAAAAGCCGTTGGGTTGTGAAGGTAGATAAATGCACTGGCGAGGAACATGTGTTCAGGGTCAGATCTCCTCAAAGGAAAGTGATCCAAGCTTAA 672 0.4598 MAYWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACAGAADSTTLALVAAAHQTGGQVICVVPGHEELRASKVALGVASQQVQFLVGEAEKLLLKQCDQAADFVLIDCNLENHEEILKAVEEGRKQNGTVVVVGYNAFSCRKSCLACGSKTQLLPIGEGLLVTRFGIRETSPKYGKKMGKGKSRWVVKVDKCTGEEHVFRVRSPQRKVIQA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00312 223 Pfam Protein of unknown function (DUF1442) 4 212 IPR009902 -
Spst10g00312 223 Gene3D Vaccinia Virus protein VP39 5 176 IPR029063 -
Spst10g00312 223 PANTHER DUF1442 FAMILY PROTEIN 3 212 IPR009902 -
Spst10g00312 223 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 148 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00312 Spst-Chr10 3134831 3135634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00312 - - gmx:100816283 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00312 10 3134831 3135634 Spst10g00312 10 3134831 3135634 ECH
Spst4g01661 4 56352853 56353961 Spst10g00312 10 3134831 3135634 PCT