Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01550 ATGGCCTCCAACAACCTCCTCACCGTCACCCGCCGCCTCCGCCTCCGCCTCCGCCTCCCCCTCTCCACCCGCCCCTTCTCCGCTGCCCCAGCGACCTCCTCCCTCCCCGCCCCGCCTCCGCCCAACGCCATGCTCTACGACCGCCTCTCCGCCGCCACCAATGCCAAGCTCCGCCGCCTCGAGCACCCCGACCCCCGCTTCCTCAAGTACGGCTCCCCCGTCCCCTCCACAGCCGACCACACGCGCGTCCTCGGTGCACCCATGACCCGCGTGACCACGCTCCCCAGTGGCCTTCGCGTCGCCACCGAGTCCTCCCTCGCCGCCCGCACCGCCACCGTCGGCGTTTGGATCGACGCCGGGTCGCGGTTCGAGACCGAGGAGACCAACGGCACCGCTCACTTCCTCGAACACATGATCTTCAAGGGCACCGCGAAGCGCACCGTCAGGGAGCTCGAGGAGGAGATCGAGAACATGGGGGGGCACCTCAACGCGTACACCTCGCGCGAACAGACCACTTACTACGCTAAGGTCACGGACAAGGATGTTCCCAAGGCGCTTGATATTCTGGCTGATATCTTGCAGAATTCGAAGTTCGATGACAATAGGATTATCCGCGAGCGTGATGTGATTCTCAGGGAAATGGAAGAGGTTGAGGAACAAATGGAAGAAGTAGTCTTTGACCATTTACACGCAACTGCTTTCCAGTACAGTCCACTTGGTAGAACAATTCTTGGACCTGCTCAGAATATCGAGACAATCACTAAAGCTCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGGATGGTGGTTGCTGCATCTGGAGCTGTCAAGCACGAAGACATTGTTGAGCAAGTAAAAACATTGTTCTCTAAGTTGTCAACAGATCCCACCACAGCTTCTCAATTAGTTGCAAAAGAACCAGCCATTTTTACCGGTTCCGAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTCGAAGGTGCTGCGTGGACAGATCCTGATTCCGTTGCTCTGATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAGGTGGAAAACACATGGGTTCTGAGTTGGCGCAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCCTTCAATACCAATTACAAGGATACAGGTCTTTTTGGTGTTTTTGCTGTCGCTAAGAAAGATTGCTTGGATGACTTAAGCTATGCAATCATGAAAGAGACAACCAAGTTGGCTTATCGGGTTTCAGAAGATGATGTTACCCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTCCACATAGATGGAACGAGTCCCGTAGCTGAAGATATTGGGCGTCAGCTACTCACCTACGGCAGAAGAATACCATTTGCAGAATTGTTTGCTAGAATTGATGCTGTTGATGCAAGCACAATAAAACGTGTTGCTAACCGATTTATTTATGACAAGGATATTGTAATTGCTGCTATGGGACCTATTCAGCGTTTGCCTGATTACAACTGGTTCAGACGCAGAACCTACTGGAATCGCTATTAG 1572 0.5223 MASNNLLTVTRRLRLRLRLPLSTRPFSAAPATSSLPAPPPPNAMLYDRLSAATNAKLRRLEHPDPRFLKYGSPVPSTADHTRVLGAPMTRVTTLPSGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPKALDILADILQNSKFDDNRIIRERDVILREMEEVEEQMEEVVFDHLHATAFQYSPLGRTILGPAQNIETITKAHLQNYIQTHYTAPRMVVAASGAVKHEDIVEQVKTLFSKLSTDPTTASQLVAKEPAIFTGSEVRILDDDIPLAQFAVAFEGAAWTDPDSVALMVMQAMLGSWNKSTGGGKHMGSELAQRVGINEVAESMMAFNTNYKDTGLFGVFAVAKKDCLDDLSYAIMKETTKLAYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDIVIAAMGPIQRLPDYNWFRRRTYWNRY 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01550 523 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 309 523 - -
Spst4g01550 523 Gene3D - 76 299 - -
Spst4g01550 523 ProSitePatterns Insulinase family, zinc-binding region signature. 120 143 IPR001431 GO:0004222|GO:0006508
Spst4g01550 523 SUPERFAMILY LuxS/MPP-like metallohydrolase 317 513 IPR011249 GO:0046872
Spst4g01550 523 Pfam Peptidase M16 inactive domain 253 438 IPR007863 -
Spst4g01550 523 SUPERFAMILY LuxS/MPP-like metallohydrolase 89 292 IPR011249 GO:0046872
Spst4g01550 523 Coils Coil 148 168 - -
Spst4g01550 523 Pfam Insulinase (Peptidase family M16) 99 246 IPR011765 -
Spst4g01550 523 Gene3D - 305 523 - -
Spst4g01550 523 FunFam Mitochondrial-processing peptidase subunit beta 76 297 - -
Spst4g01550 523 PANTHER METALLOPROTEASE 85 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01550 Spst-Chr4 54528595 54534390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01550 K17732 - gmx:100800696 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03701 1 46768761 46773233 Spst4g01550 4 54528595 54534390 PCT