Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03701 ATGTCCCTCAACCGCCTCCTCTCCGCGGCCCGCCGCTCGGACCGGCGGGCCTCCGCGCTCTCCTCCCTTCGATCTCTCTCGGCGTCCCCCGCCCTCGCCCCCACCCCGCCCTCCCCTCCCGCCCCTCCGCCCCCAACCGCCATGATCTACGACCGCGCCGCGGAGGTCGTCAAGTCCAAGCTCCGCCAACTCGAGAATCCGGACCCCCGCTTCCTCAAACACGGCTCGCCCCGCCCCACACTCTCCGACCATACGCGCATCCTCGCCGCCCCCGAGACGCGCGTCACCACTCTACCCAATGGCCTCCGCGTCGCCACCGAGTCCACCCTCGCCGCCCGCACCGCTACCGTTGGCGTATGGATCGACGCCGGCTCGCGATTCGAGACCGAGGAGACCAACGGCACCGCGCACTTTCTGGAGCACATGATCTTCAAGGGCACCGAGCGCCGGAATGCGCGTGAGCTTGAGGAAGAGATCGAGAACATGGGAGGACACCTCAACGCGTACACCTCACGCGAACAGACTACATATTACGCCAAGGTTACTGACACCGATGTCCCCCAGGCCCTTGACATCCTCGCCGACATCCTTCAGAACTCTCGATTTGAGGAGAATCGCATCAGCCGCGAACGTGATGTCATTCTCCGTGAAATGGAGGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGACCACCTACACGCAACTGCGTTCCAATACACACCTCTTGGAAGAACCATTCTTGGACCTGCTCAGAACATTAAGACAATCACCAAAGCTCATCTGCAGAGCTACATTCAGACGCATTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAGGATATTGTTGAGCAAGTAAAAAAGCTGTTTACCAAGTTGTCCACAGATCCCACTACCACGACTCAATTAGTTGCTAAAGAGCCAGCTATTTTCACTGGTTCTGAGGTTAGAATGCTTGATGATGATATTCCCCTTGCACAATTTGCGGTGGCTTTTGAAGGGGCATCTTGGAAGGACCCAGATTCAATTGCTCTCATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAGACCGCAGGAGGTGGTAAACACATGGGTTCCGAGTTAGCACAACGAGTTGGCATTAATGAAGTTGCAGAGAGCATAATGGCTTTCAACACCAATTACAAGGACACAGGTCTTTTTGGTGTTTATGTTGTTGCTAAGCCTGATAGCTTGGATGATTTGTCATATGCAATCATGTATGAGACAACCAAGTTGGCTTATCGTGTTTCAGAAGATGACGTTACACGTGCCTGTAATCAGTTAAAATCTTCGTTGCTACTACACATAGATGGAACAAGTCCAATAGCTGAAGATATTGGCCGTCAGCTGCTTACCTATGGTAGAAGAATCCCATTTGCTGAATTGTTTGCTAGAATTGATGCGGTTGATGCCAGTACAATTAAGCGGGTTGCGAACAGGTTTATTTATGACAAGGACGTAGCTATTGCTGCCATGGGTCCTATCCAGCGTTTGCCTGATTACAACTGGTTCAGACGCAGAACCTACTGGAACAGATATTAG 1584 0.5284 MSLNRLLSAARRSDRRASALSSLRSLSASPALAPTPPSPPAPPPPTAMIYDRAAEVVKSKLRQLENPDPRFLKHGSPRPTLSDHTRILAAPETRVTTLPNGLRVATESTLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDTDVPQALDILADILQNSRFEENRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQSYIQTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTTTQLVAKEPAIFTGSEVRMLDDDIPLAQFAVAFEGASWKDPDSIALMVMQAMLGSWNKTAGGGKHMGSELAQRVGINEVAESIMAFNTNYKDTGLFGVYVVAKPDSLDDLSYAIMYETTKLAYRVSEDDVTRACNQLKSSLLLHIDGTSPIAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVAIAAMGPIQRLPDYNWFRRRTYWNRY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03701 527 FunFam Mitochondrial-processing peptidase subunit beta 80 301 - -
Spst1g03701 527 Coils Coil 152 172 - -
Spst1g03701 527 MobiDBLite consensus disorder prediction 1 46 - -
Spst1g03701 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 517 IPR011249 GO:0046872
Spst1g03701 527 PANTHER METALLOPROTEASE 89 513 - -
Spst1g03701 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 90 296 IPR011249 GO:0046872
Spst1g03701 527 Gene3D - 80 302 - -
Spst1g03701 527 Gene3D - 309 527 - -
Spst1g03701 527 Pfam Insulinase (Peptidase family M16) 103 250 IPR011765 -
Spst1g03701 527 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 313 527 - -
Spst1g03701 527 MobiDBLite consensus disorder prediction 32 46 - -
Spst1g03701 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Spst1g03701 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03701 Spst-Chr1 46768761 46773233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03701 K17732 - gmx:100777553 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03701 1 46768761 46773233 Spst4g01550 4 54528595 54534390 PCT