Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01504 ATGTACGCTGATCTCGTGGAGAATGGAGGGCGGAGGTCCGTGAAGGAGCGCCTTAATGGGAATGGTACTAGTGGTCCTACTCGGCTGCAGCAACAGCGTCAAATCACCGGCAAGAGAATTGCTGTTCTCCCGCAATTTGCTATAGTGTTTTTGAGGTCGAGGCAAGATGACAAGTGGGAACATGATCTTTTTGACGATGGTGAACCACAGATCACTAATCGCAAAGTTAGTGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAATCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAACATGCGTGATCTCCGTGAAAGGCTATCAGGAACAATGACAGTACAACCTACAAATGCTGATCCGCCAAAATCAAAAGTTGTTAAACCAAGCAGTAAAAATATTGGTGTTGAGGTCCCTGCAGTGCAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAGGTCTCGGAAGGCTGACACTTCAATTGATGAATTTTTGCGGTCCTTGGGTCTTGAAAAGTACCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGCATACCAATGTTTCATTGA 624 0.4519 MYADLVENGGRRSVKERLNGNGTSGPTRLQQQRQITGKRIAVLPQFAIVFLRSRQDDKWEHDLFDDGEPQITNRKVSAQDLRLKLQRKGLQSASQSGKSYAPNMRDLRERLSGTMTVQPTNADPPKSKVVKPSSKNIGVEVPAVQIKRPADPAPKRSRKADTSIDEFLRSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMFH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01504 207 CDD SAM_superfamily 166 203 - -
Spst4g01504 207 MobiDBLite consensus disorder prediction 1 33 - -
Spst4g01504 207 MobiDBLite consensus disorder prediction 17 33 - -
Spst4g01504 207 SUPERFAMILY SAM/Pointed domain 160 207 IPR013761 -
Spst4g01504 207 Gene3D - 161 207 IPR013761 -
Spst4g01504 207 ProSiteProfiles SAM domain profile. 159 207 IPR001660 GO:0005515
Spst4g01504 207 PANTHER SCP160 121 204 - -
Spst4g01504 207 Pfam SAM domain (Sterile alpha motif) 160 203 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01504 Spst-Chr4 53838357 53845800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01504 54 205 Glycosyltransferase AT3G07170 55.844 1.52e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01504 - - gmx:100784706 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00458 1 6020414 6025338 Spst4g01504 4 53838357 53845800 PCT