Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01459 ATGGAGTTCGAAGACCGCTTCAGACACCAGGCTCAGAGATCAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCCCTCAAATCTGGTCTTGCAAAAGCATGTCTCAAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATAGACCCAAGCAAAATTGATGACTTGTCCAACCTCCTTTACAAGAATTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCATAGTTTTGTTCATGGGAGATTACCTTATGAGAACCTAAAACCAGACCCAGTTCTGAGGAACCTGTTGCTGAGCCTGCCCTATAGGAAACTTATCTTCACAAATGCAGACAAAGTCCACGCGGCTAAGGCACTTAACAGGCTTGGATTAGAAGACTGCTTCGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAGAGCACTGTTTCTGATGATGAAGATGACATTGAGTTTGTGGGTTCAAGGGCAACCAATCCAACCACTAGTAGTAATGGTCCAGGCACTTCTCAAATCTTTGACATCATAGACCATTTCGCTAAGCCAAATCCCAGTCCAGTCTTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCCATTGAATTGGCCCTCAAGATAGCCAACCTTAACCCTCAAAGAACTTTGTTCTTTGAGGACAGTACCCGTAACATACAAGCTGGAAAACGTGTGGGCCTTCACACTGTGCTGGTTGGTACATCCCAAAGATGTAAGGGTGCAGATTATGCTTTGGAAAGCATTCACAACCTTAGAGAAGCTGTGCCAGAACTAAGGGAGGCTGATATAAAATCAGAAGTTGGATACCCTGGAAAGCTAGCTGTGGAGACACCTGTCACAGCTTGA 912 0.4265 MEFEDRFRHQAQRSKYDCLLFDLDDTLYPLKSGLAKACLKNIKDYMVEKLGIDPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEDCFEGIICFETLNPIHKSTVSDDEDDIEFVGSRATNPTTSSNGPGTSQIFDIIDHFAKPNPSPVLPKTPIICKPSENAIELALKIANLNPQRTLFFEDSTRNIQAGKRVGLHTVLVGTSQRCKGADYALESIHNLREAVPELREADIKSEVGYPGKLAVETPVTA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01459 303 SUPERFAMILY HAD-like 15 279 IPR036412 -
Spst4g01459 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 6 302 - -
Spst4g01459 303 NCBIfam HAD-IA family hydrolase 209 254 IPR006439 -
Spst4g01459 303 Gene3D - 82 280 IPR023214 -
Spst4g01459 303 NCBIfam pyrimidine 5'-nucleotidase 17 254 IPR010237 -
Spst4g01459 303 SFLD C1.5.3: 5'-Nucleotidase Like 10 282 IPR010237 -
Spst4g01459 303 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 282 - -
Spst4g01459 303 CDD HAD_5NT 18 256 IPR010237 -
Spst4g01459 303 Pfam Haloacid dehalogenase-like hydrolase 211 254 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01459 Spst-Chr4 53063142 53064994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01459 K07025 - gmx:100796466 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00578 1 7575100 7577015 Spst4g01459 4 53063142 53064994 PCT