Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01383 ATGGGAAAGGATAGGATAATCGGTGTCGCCTTGGATTTTTCCAAGAGCAGCAAAAATGCTCTGAAATGGGCACTTGAGAACTTAGCTGATAAGGGTGACACCATTTATGTCATTCACATCAGCCCCAATTCTTTAGACGAGTCTCGCAACCAGCTTTGGTCTACATCCGGTTCTCCTCTAATTCCTTTGCAAGAGTTCAGAGAGCCTGAGATTATGAACAAGTACGGTGTTCAGATTGATATTGAGGTCCTTGATATGCTTGACACTGCTTTTAGACAGAAAGAGGTGCACATTGTTGCAAAAATTTACTGGGGAGATGCAAGAGAGAAACTTTTGGATGCGATTGAAGATCTGAAGCTGGATTCGCTAGTTTTGGGAAGCAGGGGCCTTAGCACAATCCAAAGGATCATTTTGGGAAGTGTAAGCAACTTTGTGATGACCCATGCCTCATGCCCTGTGACTATAGTCAAGGAACCAAGCAGCAAGTAA 489 0.4376 MGKDRIIGVALDFSKSSKNALKWALENLADKGDTIYVIHISPNSLDESRNQLWSTSGSPLIPLQEFREPEIMNKYGVQIDIEVLDMLDTAFRQKEVHIVAKIYWGDAREKLLDAIEDLKLDSLVLGSRGLSTIQRIILGSVSNFVMTHASCPVTIVKEPSSK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01383 162 CDD USP_Like 7 156 - -
Spst4g01383 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 159 - -
Spst4g01383 162 PRINTS Universal stress protein signature 4 22 IPR006015 -
Spst4g01383 162 PRINTS Universal stress protein signature 117 129 IPR006015 -
Spst4g01383 162 PRINTS Universal stress protein signature 135 157 IPR006015 -
Spst4g01383 162 Gene3D HUPs 3 162 IPR014729 -
Spst4g01383 162 FunFam Universal stress protein family protein 1 160 - -
Spst4g01383 162 Pfam Universal stress protein family 5 157 IPR006016 -
Spst4g01383 162 PANTHER IMP2'P 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01383 Spst-Chr4 51558396 51559488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01383 3 156 Receptor kinase-like Gene Family AT5G35380 27.044 6.11e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01383 - - gmx:100306513 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00639 1 8352300 8353115 Spst4g01383 4 51558396 51559488 PCT