Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00639 ATGGTAAAGGACAGGAAAGTTGGTGTTGCATTGGACTTCTCCAAGAACAGCAAGATTGGTCTCAAATGGGCAATTGAGAACTTGGCTGATAAAGGTCACACCTTGTACATCATCCACGTCAACCCCTATTCCTCTGATGATCGTAATAAGTTGTGGTCCAAATCTGGTTCTCCTCCTATTCCTTTGACTGAGTTCAGAGAGGCAGAGGTTATGAAGAACTATGGCGTGCAAAGTGATGCCGAGGTCCTTGATTTGCTTGACACTGCCACCAGACAAAAAGAGGTGAACGCTCTCGTAAAATTGTACTGGGGTGATGTAAGAGAGAAAGTGTTGGATTCCATTGAAGATCTAAAGCTGGACTCTTTGGTCATGGGAAGCAGAGGTCTTAGCACAATCCGAAGGATGATATTGGGAAGTGTAAGCAACTTTGTGATGATACATGCTCCATGCCCAGTGATCATTGTGAAGGAGTAG 474 0.4451 MVKDRKVGVALDFSKNSKIGLKWAIENLADKGHTLYIIHVNPYSSDDRNKLWSKSGSPPIPLTEFREAEVMKNYGVQSDAEVLDLLDTATRQKEVNALVKLYWGDVREKVLDSIEDLKLDSLVMGSRGLSTIRRMILGSVSNFVMIHAPCPVIIVKE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00639 157 Gene3D HUPs 1 157 IPR014729 -
Spst1g00639 157 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 156 - -
Spst1g00639 157 PANTHER IMP2'P 1 157 - -
Spst1g00639 157 Pfam Universal stress protein family 5 156 IPR006016 -
Spst1g00639 157 PRINTS Universal stress protein signature 134 156 IPR006015 -
Spst1g00639 157 PRINTS Universal stress protein signature 4 22 IPR006015 -
Spst1g00639 157 PRINTS Universal stress protein signature 116 128 IPR006015 -
Spst1g00639 157 FunFam Universal stress protein family protein 1 157 - -
Spst1g00639 157 CDD USP_Like 6 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00639 Spst-Chr1 8352300 8353115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00639 3 155 Receptor kinase-like Gene Family AT5G35380 26.994 1.06e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00639 - - gmx:100306368 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00639 1 8352300 8353115 Spst1g00639 1 8352300 8353115 ECH
Spst1g00639 1 8352300 8353115 Spst4g01383 4 51558396 51559488 PCT