Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01287 TACGAAAAGGGTCTTTTATATAGTTCATTCTCGGAGTCTCTGGACCAAAAACAAAAACACCAACTTTGTAACTCTGCAGAGGAGACAATGTTGTCTCAGAAGCAAGCAGAGGAAGCAATAGTCAGCAACCTCAACGAGACAGAACATGAAGTGGGAAGCACAAGGGAAGAAGAGAGGGAGCAAGACCACTCCATGTTCAGTCTCAAGAGCATCCTTTGGCATGGTGGTTCTGTTTGGGATGCATGGTTCAGCTGTGCCTCAAATCAAGTGGCTCAAGTGCTCTTGACACTCCCATACTCCTTCTCTCAACTTGGCATGCTATCAGGCATCTTGTTTCAGGTGTTCTATGGAATTATTGGAAGCTGGACTGCTTATCTAATCAGTGTCCTCTACGTTGAGTACCGCACCAGAAAGGAAAAGGAAAACGTCAACTTCAAGAACCATGTCATTCAGTGGTTCGAAGTCCTTGATGGGTTACTTGGTCCATATTGGAAAGCAGTGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATACAGCTTATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGATAAACGGACTTGGACTTATATATTTGGAGCTTGCTGTGCCACCACTGTCTTCATACCTTCCTTCCACAATTACCGAATCTGGTCATTTTTGGGTCTTGGAATGACCACTTACACGGCTTGGTACCTTGCTGTAGCAGCTATTGTTCATGGCCAGGTGGAAAATGTCACACACTCGGCTCCAACTAAGCTAGTGCTATACTTCACTGGAGCCACCAACATACTCTATACGTTTGGAGGACATGCTGTGACTGTAGAGATTATGCATGCGATGTGGAAGCCCCAAAAGTTCAAGTACATCTACTTGCTCGCCACTTTGTACGTTTACACACTAACTATTCCTTCCGCCGTCGCCGTTTACTGGGCTTTCGGTGATATGCTTCTTAACCACTCCAACGCCTTCTCTCTCCTCCCCAAGTCCGGCTTCCGTGACGCCGCCGTTATCCTGATGCTGATTCACCAGTTCATCACATTTGGGTTTGCGTGCACTCCATTGTATTTTGTGTGGGAGAAGGTGATTGGAATGCATGACACAAAGAGTATTTGTTTGAGGGCACTTGCACGATTGCCAGTGGTGATACCTATCTGGTTCTTGGCTATAATCTTCCCTTTCTTCGGCCCCATAAATTCAGCTGTTGGATCTCTGCTCGTTAGTTTCACTGTCTACATCATCCCTTCCTTAGCCCATATGCTCACCTACAGGAAAGCCTCTGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGTTGGACAGCAATGTATGTGTTGAATGCATTCATTGTTGTATGGGTTTTTGTTGTTGGGTTTGGGCTTGGAGGATGGGCCAGCATGACAAACTTCATAAGGCAAATAGACACATTTGGGCTTTTTGCTAAATGCTACCAGTGCCCTCCACCAGCACCACCACATGTTGTGGCAGCACCACCCCCTCATGCCCATCATTAG 1548 0.4612 YEKGLLYSSFSESLDQKQKHQLCNSAEETMLSQKQAEEAIVSNLNETEHEVGSTREEEREQDHSMFSLKSILWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQVFYGIIGSWTAYLISVLYVEYRTRKEKENVNFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAVAAIVHGQVENVTHSAPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVYTLTIPSAVAVYWAFGDMLLNHSNAFSLLPKSGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSLAHMLTYRKASARQNAAEKPPFFMPSWTAMYVLNAFIVVWVFVVGFGLGGWASMTNFIRQIDTFGLFAKCYQCPPPAPPHVVAAPPPHAHH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01287 515 Pfam Transmembrane amino acid transporter protein 74 467 IPR013057 -
Spst4g01287 515 PANTHER OS05G0424000 PROTEIN-RELATED 62 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01287 Spst-Chr4 49442882 49447541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01287 32 515 Organic Solute Cotransporters AT2G21050 76.860 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01287 K13946 - gmx:100778463 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00704 1 9224578 9229849 Spst4g01287 4 49442882 49447541 PCT