Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00704 ATGGAAACAATGTTGCCTCAGAAGCAAGCAGAAGAAGCAATAGTGGCAAGCCTTAACGAGACAGAGAGTGAAGTGGGTGGTGTAAAGGAAGAAGAGAAGGAGTTGCAAGATCACTCCATGTTCAGCATCAAGAGCTTCCTCTGGCATGGAGGTTCTGTTTGGGACGCATGGTTCAGCTGTGCTTCTAATCAAGTGGCCCAAGTACTGTTGACACTGCCCTATTCTTTCTCTCAACTTGGCATGATATCAGGGATCTTGCTTCAAATTTTCTATGGAATCATGGGAAGTTGGACAGCGTATCTAATAAGTGTCCTCTACATGGAGTACCGTTCCAGAAAGGAAAAAGAAAATGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTTGACGGGTTGCTGGGTCCGTATTGGAAAGCTGTGGGGTTAGCCTTCAACTGTACTTTCCTTCTCTTTGGATCTGTGATTCAGCTTATAGCATGTGCAAGTAACATCTACTACATAAATGATCACTTGGACAAACGGACTTGGACTTACATCTTTGGAGCTTGCTGTGCCACCTCTGTGTTCATACCCTCCTTCCACAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACTGCTTGGTATTTGGCTATAGCAGCTCTCATTCATGGCCAGGCAGAAAATGTGATACACACGGGACCAACAAAGCTAGTGCTGTACTTTACTGGAGCCACCAACATACTGTACACGTTTGGTGGACATGCAGTTACTGTAGAGATTATGCACGCCATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGCTGGCCACTTTGTACGTTTTCACGCTAACGATTCCTTCTGCTGCTGCCGTTTACTGGGCTTTTGGTGATGAACTTCTCAATCATTCCAATGCCTTCTCTCTCCTCCCAAAAAATAGATTTCGTGATGCTGCTGTAATCCTCATGCTCATTCACCAGTTCATCACGTTCGGTTTCGCTAGTACTCCACTGTACTTTGTCTGGGAGAAGGTAATTGGGATGCATGACGCAAAAAGCATTTGTCTAAGGGCACTTGCAAGGTTGCCAGTGGTGATACCTATATGGTTTTTGGCCATAATCTTCCCTTTCTTTGGGCCCATAAACTCTGCAGTTGGAGCTCTTCTGGTTAGTTTTACTGTCTACATCATCCCCTCCACAGCACACATGCTTACTTACAGAAAAGCCTCTGCAAGACAGAATGCTGCTGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCAATGTATGTGTTCAATGCATTCATTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGGTTTGGAGGATGGGCCAGCATGTCCAACTTCATCAAGCAAATTGACACATTTGGGCTCTTTGCCAAGTGCTACCAATGCAAGTCCCCGACTCCACCACCACCCATGGCAGCAGCACCACCACCTCACCACCATCACTGA 1476 0.4573 METMLPQKQAEEAIVASLNETESEVGGVKEEEKELQDHSMFSIKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMISGILLQIFYGIMGSWTAYLISVLYMEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATSVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQAENVIHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNRFRDAAVILMLIHQFITFGFASTPLYFVWEKVIGMHDAKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSTAHMLTYRKASARQNAAEKPPFFMPSWTAMYVFNAFIVVWVLVVGFGFGGWASMSNFIKQIDTFGLFAKCYQCKSPTPPPPMAAAPPPHHHH 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00704 491 Coils Coil 18 38 - -
Spst1g00704 491 Pfam Transmembrane amino acid transporter protein 49 442 IPR013057 -
Spst1g00704 491 PANTHER OS05G0424000 PROTEIN-RELATED 54 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00704 Spst-Chr1 9224578 9229849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00704 7 490 Organic Solute Cotransporters AT2G21050 75.207 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00704 K13946 - gmx:100810532 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00704 1 9224578 9229849 Spst4g01287 4 49442882 49447541 PCT