Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01279 ATGTTTGTTCATCGGGTGCTGAAACAAGCCAAGCCATCTGTCTTTTCTCTAATCACTTTCTCTGCCATAGTTTTTCTCATATATGCAGATACTATTAGTATTATCTACCATGATTCCCTATACTCTGCAGCTAAAACAGAAGCTCCAGAGAAGTTGGAACTTTACAATCATAGAACAATAGAAGCAATAAGGTCAACACTTGTTCAAATACCTTTTCGTTCCATTCAAGAGAAGGATGAAGCTGAGAGGCGAAACCATTATAGTCTGGTTGCCCCATTCAATGCCACAGAAGAAGAAAGAATAGCTTGGTTTCGAGAACATCTGCATCACTTCAAGATCCTCAAGTCAAACAACTTGACCCGACAGTTTCATGCTCGAGTTGTGAAATTTTTTGGCCACAAATGCAAGGCTAAATTTTTCATGACTTGGATTTCACCAGCAAGTTTGTTTGGAGGGAGAGAATTGCTGTCTGTGGAAAGCATTTTCAAGAACCATCCCAAGGCATGTCTGTTAATTCTATCAAGAACTTTGGACACCAGACATGGCTACAGGATCCTGAAACCGCTGCATGATCGCAGGTTCAAAGTGCAAGCAATGGCCCCAGACTTGTCATTTTTGGTCAAGAAGACCCCAGCGGAATCTTGGTTTCATGAGCTAAAGAAGGGTAGAAAGGATCCTGGTGAGATTCCGTTATCTCAGAATCTATCTAATCTGATAAGACTTGCAGTTCTCTACAAATATGGCGGTATATACATAGATACAGATTTTATAATTATGAAACCCTTAACAGGGCTAAGGAATTGTATTGGTGCACAGAGCATGAGTTTGGGTTCTAAGCATTGGACCAGATTAAATAATGCAGTTCTGATTTTTGATATGAGACATCCACTTCTGCATAAATTCATCAGTGAATTTGCATTGACTTTTGATGGAAACAAATGGGGGCATAACGGTCCCTACCTGGTTTCAAGAGTGATTGAGAGACTGAGGAAAAGACATGATTTCAACTTTACAATCTTGCCTCCTGTGGCGTTTTATCCAGTAGACTGGAACAAGATAACTGGGTTTTTTACAAAACCAAAAACACTAAGCGAATCAAGATGGGTAGAAGCCAAACTGCTTCAGCTCAGAGGGAAGAACACTTATGGGATTCATTTATGGAACAAACGTAGTAGCAGATTGACAATTGAAGAAGGAAGTGTCATTGGAAGACTTATATCAAATTATAGTGTCATTTGCAAACATTAG 1248 0.3958 MFVHRVLKQAKPSVFSLITFSAIVFLIYADTISIIYHDSLYSAAKTEAPEKLELYNHRTIEAIRSTLVQIPFRSIQEKDEAERRNHYSLVAPFNATEEERIAWFREHLHHFKILKSNNLTRQFHARVVKFFGHKCKAKFFMTWISPASLFGGRELLSVESIFKNHPKACLLILSRTLDTRHGYRILKPLHDRRFKVQAMAPDLSFLVKKTPAESWFHELKKGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDFIIMKPLTGLRNCIGAQSMSLGSKHWTRLNNAVLIFDMRHPLLHKFISEFALTFDGNKWGHNGPYLVSRVIERLRKRHDFNFTILPPVAFYPVDWNKITGFFTKPKTLSESRWVEAKLLQLRGKNTYGIHLWNKRSSRLTIEEGSVIGRLISNYSVICKH 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01279 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 13 414 IPR044789 -
Spst4g01279 415 Pfam Glycosyltransferase sugar-binding region containing DXD motif 153 273 IPR007577 -
Spst4g01279 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 413 IPR029044 -
Spst4g01279 415 Gene3D - 164 342 - -
Spst4g01279 415 Pfam Alpha 1,4-glycosyltransferase conserved region 291 409 IPR007652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01279 Spst-Chr4 49239119 49240366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01279 7 415 Glycosyltransferase AT2G38150 46.359 3.83e-129 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01279 K01988 - gmx:100781975 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00710 1 9251021 9253127 Spst4g01279 4 49239119 49240366 PCT