Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00710 ATGATATCATGGTACTCAAGATTCCTTACACCTTTCTGCAAGCAAAGGAGCACTAGAAATGTTGGAAGCTCGGACTCACAGAAATGGAGAGGGCATAAAGGCAACTCTTCTTCTAACACTTACCCATTACGTTCCATGCAAGAAGAGAATGAAGGAGTTGGTAAAGAAAATCATGTAGTGCTAGTTGCTCCAATTAATGCAACTGAAGAAGAAAAAAATGTTTGGTTTAAAGGGAAGCTTCACGAGTTCCATGCAGATAAATTGAGTAGGCAATTCCATGCTCGGGTTCTGGGATTTTTCAGCCATGAATGTGAGTCTCCATTTTTCATGACGTGGGAGTGCCATGCAGGCTCATATGAAGCAAGAGAATTGTTGTCTATAGAGAGTCTTTTCAAGGTGCATCCCAAGGCATGTTTGGCAGTGACCCCAGACTTCCCAATTCTGTCCAAAGGGACTCCAGCTGAAGCGTGGTTGAATGAGTTGAGTAAAGGAAAGAAGAGCCCTGGTGAGATTTCTCTGTTTCAGAACTTATCTGACTTGATCAGACTTGCAGATCTGTACAAAAATGGTGGTGTGTACCTAGACACATCTTTTGTAGTCTTGAAACCTTCAGCTGGGTTGAGGAATTCTATTGCAGCACAAAGCATGGCCTCTAGGAATAAGCATTGGACTAGACTAAACAATGCAGTCCTGAGATTTGACATGAATCATCCACTTCTTCTTAGATTCAGTAATGAACTTGTTTTAGCTTTTAATGGGAACAAATGGGGGCATAATGGTCCTTACATGCAGTGA 795 0.4189 MISWYSRFLTPFCKQRSTRNVGSSDSQKWRGHKGNSSSNTYPLRSMQEENEGVGKENHVVLVAPINATEEEKNVWFKGKLHEFHADKLSRQFHARVLGFFSHECESPFFMTWECHAGSYEARELLSIESLFKVHPKACLAVTPDFPILSKGTPAEAWLNELSKGKKSPGEISLFQNLSDLIRLADLYKNGGVYLDTSFVVLKPSAGLRNSIAAQSMASRNKHWTRLNNAVLRFDMNHPLLLRFSNELVLAFNGNKWGHNGPYMQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00710 264 SUPERFAMILY Nucleotide-diphospho-sugar transferases 141 262 IPR029044 -
Spst1g00710 264 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 20 140 IPR044789 -
Spst1g00710 264 Pfam Glycosyltransferase sugar-binding region containing DXD motif 122 215 IPR007577 -
Spst1g00710 264 Gene3D - 29 264 - -
Spst1g00710 264 MobiDBLite consensus disorder prediction 17 46 - -
Spst1g00710 264 MobiDBLite consensus disorder prediction 17 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00710 Spst-Chr1 9251021 9253127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00710 80 263 Glycosyltransferase AT5G01250 49.763 9.73e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00710 K01988 - gmx:100812965 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00710 1 9251021 9253127 Spst1g00710 1 9251021 9253127 ECH
Spst1g00710 1 9251021 9253127 Spst4g01279 4 49239119 49240366 PCT