Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01225 ATGCATCAAAAGAAATCCGAACTCCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCCACTCCACTACCACTCCAACCACCACCACCAACACCACCACCCTATTCCCAACCTAACTCTTAACACGAACCTCGAAACCCTAACCTCCACCGCCCCCTACAAAAGACCCTCCCTCTCCAAATCCCAAACCATCCACAGATTCCCGAAACCGCGACACGCCACCACTCCCTCCACCACCGCCGCCACCGCAACCGCCACGTGGCTCTCCTCCGTAGTTTCCTTGCGACGTCGCCTCCGCCACCGCCTCCGCCTCTTCCTCTTCCTCTCCCTCCCCTTCTTCTACTTCCTTGTCTCTCACCCTACAAACTCCTTCCTTCTCGATTTCCTCTCCGCGTTCTTCTTCTCCGCCGCGCTTTTCTTCTCGCTCAATCTCGCCCTACCCCGAATTCCCTCCCTCCGTCTCTTTCTCAAGCCTAAGGCCCGGCCTGCGCTCAGGCTCCCCGTGTTCTGGGCCCGCCCCGCCCCGCCCGAGTTTCAATTCTCCGTGGTTGCGTACTCGAACGGCGACGTTTACGAGGGGGAGTTCAGGGGAGGGAAGTGCTGTGGGAGTGGGGTTTACTACTACAACATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTATGATGGGTTTGGGGTGGAAACGTGGGCGAGAGGGAGTAGGTACCGGGGGCAGTACCGGCAGGGGCTCCGGCACGGGTTCGGGGTGTACCGGTTTTATACCGGTGATGTTTATGCGGGGGAGTGGGCCAGTGGGCAGAGCCATGGTTGTGGGGTGCACACGTGCGAGGATGGAAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTACCATTTTAGAAATGGGGATACTTATGCTGGTGAATACTTTGCGGATAAGATGCATGGGTATGGAGTGTATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGCAAAAGACAAGGTCTTGGAATGTATACATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAGAGTGCCACCTATCCTGTTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTAAATGCAGTGCAGGAAGCAAGAAGAGCAGCTAAGAAGGCCTATGATGTGACCAAGGTAGATGAAAGGGCGAATAGAGCAGTAGCAGCCGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTTCTGTCAAGGCTGTGCAAAATCAAATGCATCATAATGTTAACAGCAAGAGCATCCCAATCCCCATTGTGTGA 1353 0.541 MHQKKSELQIGKESTGVSSDFNPLHYHSNHHHQHHHPIPNLTLNTNLETLTSTAPYKRPSLSKSQTIHRFPKPRHATTPSTTAATATATWLSSVVSLRRRLRHRLRLFLFLSLPFFYFLVSHPTNSFLLDFLSAFFFSAALFFSLNLALPRIPSLRLFLKPKARPALRLPVFWARPAPPEFQFSVVAYSNGDVYEGEFRGGKCCGSGVYYYNMSGRYEGDWVEGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGYGVYSFANGHCYEGSWHEGKRQGLGMYTFRNGETQSGHWQNGVLDIPSTQSATYPVSPVGVNHSRVLNAVQEARRAAKKAYDVTKVDERANRAVAAANRAANAARVASVKAVQNQMHHNVNSKSIPIPIV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01225 450 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 188 293 - -
Spst4g01225 450 Pfam MORN repeat 332 353 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 194 213 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 309 330 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 286 308 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 217 239 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 263 285 IPR003409 -
Spst4g01225 450 Pfam MORN repeat 240 262 IPR003409 -
Spst4g01225 450 Gene3D - 315 379 - -
Spst4g01225 450 Gene3D - 269 314 - -
Spst4g01225 450 Gene3D - 183 223 - -
Spst4g01225 450 Gene3D - 224 268 - -
Spst4g01225 450 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 269 314 - -
Spst4g01225 450 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 315 360 - -
Spst4g01225 450 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 281 365 - -
Spst4g01225 450 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 184 405 - -
Spst4g01225 450 SMART morn 307 328 IPR003409 -
Spst4g01225 450 SMART morn 192 213 IPR003409 -
Spst4g01225 450 SMART morn 330 351 IPR003409 -
Spst4g01225 450 SMART morn 284 305 IPR003409 -
Spst4g01225 450 SMART morn 261 282 IPR003409 -
Spst4g01225 450 SMART morn 238 259 IPR003409 -
Spst4g01225 450 SMART morn 215 236 IPR003409 -
Spst4g01225 450 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 223 268 - -
Spst4g01225 450 MobiDBLite consensus disorder prediction 10 24 - -
Spst4g01225 450 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01225 Spst-Chr4 46792413 46798034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01225 187 365 Acyl Lipid Metabolism Gene Families AT1G60890 38.547 1.26e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01225 - - gmx:100784010 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01225 4 46792413 46798034 Spst1g00024 1 366845 372480 PCT