Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00024 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAATCCTTCGCCCCCTCTGCAATACCAGAAACACCCTCACCACCGCCACCAATTCTACCCGCAAATCGAAATCGACATCTCCCCACCGCAACAGCGAAACGCGGCGCCGCAGCCAACCCCTCCGCCCTCCCTCTCCAAGCAGAAGCATCTCCACCCGCACGCCCAGCCGCCTTTCTTCAAGTCCCACAACGCCGCCTTCTTCTCCGTAACGGTTGCTGCCAAGAGCGCTGCGTTCCGCGCGCTTCGGCGCGTGAGGAGGCAGCGCGCGTTGCTACTACTCGCCGTGCCGCTTCTCTACCTCTACTTCCTCGTCTCGCGTTCCTTCCTCCTCGACCTCCTCTCCGCGATCGCCTTCTCCGCCGCGCTCGTGTTCTCGCTTAACCTTGCGTTCCCGCTGCCGCTCCGCTCGATTCGGCTCAAGGCCCCGTCCGCGGTGGTCACACGCCCCGCGCCGCCGCTGCCGGTTTTCTGGACTATCGGTTCTCGGCCCAAGTCGGAGATGCGCGTGGCGTCGGGGTGCTGGGTGCAGGTGTTTGGAAACGGCGACGTTTATGAGGGGGAGTTTCACCGAGGAAAGTGTTCCGGGAGCGGGGTGTATTATTATAGCAGGAGTGGGAGGTACGAGGGGGATTGGGTGGATGGAAAATACGATGGCTATGGGGTGGAGACTTGGGCGCGTGGGAGTCGCTACCGAGGGTGTTACCGGCAGGGCCTGAGACACGGGTATGGCGTGTATAGGTTTTACACCGGGGATGTGTACGCCGGGGAGTGGTCTAATGGACAGAGTCACGGGTGTGGGGTTCACACGTGCGAGGATGGGAGTAGGTATGTTGGAGAGTTCAAGTGGGGTGTCAAGCATGGCCTTGGTCATTACCATTTCAGAAATGGTGATACATACGCCGGCGAATACTTTGCTGATAAGATGCATGGTTTTGGGATATATCGTTTTGCAAATGGCCATCGATATGAAGGAGCCTGGCATGAAGGTAGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGTGAAATTCAATCTGGCCACTGGCAAAATGGATTCCTTGACATTCCAAGTACACAAAACACCACTTATCCAGTTTCTTCTGTTGGTGTATCTCATTCCAAAGTGTTCAATGCTGTACAGGAAGCGAGACGAGCAGCAGAGAAAGCATATGAAGTGGCCAAGGTAGATGAAGGGGTGAACAGAGCTGTAGCAGCTTCTAATAGAGCGGCCAATGCAGCTAGAGTAGCTGCTGTGAAAGCTGCACAAAAGCGGATGCATCATGTTACCAATGAAAGCTTCGCGATTCCTGTAATGTAA 1383 0.5495 MHQKKSEVQIGKESVGVSSDFNPSPPLQYQKHPHHRHQFYPQIEIDISPPQQRNAAPQPTPPPSLSKQKHLHPHAQPPFFKSHNAAFFSVTVAAKSAAFRALRRVRRQRALLLLAVPLLYLYFLVSRSFLLDLLSAIAFSAALVFSLNLAFPLPLRSIRLKAPSAVVTRPAPPLPVFWTIGSRPKSEMRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYRQGLRHGYGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGIYRFANGHRYEGAWHEGRRQGLGMYTFRNGEIQSGHWQNGFLDIPSTQNTTYPVSSVGVSHSKVFNAVQEARRAAEKAYEVAKVDEGVNRAVAASNRAANAARVAAVKAAQKRMHHVTNESFAIPVM 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00024 460 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 280 325 - -
Spst1g00024 460 MobiDBLite consensus disorder prediction 50 73 - -
Spst1g00024 460 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 30 414 - -
Spst1g00024 460 Pfam MORN repeat 228 250 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 251 273 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 297 319 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 343 363 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 320 342 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 205 223 IPR003409 -
Spst1g00024 460 Pfam MORN repeat 274 296 IPR003409 -
Spst1g00024 460 SMART morn 318 339 IPR003409 -
Spst1g00024 460 SMART morn 249 270 IPR003409 -
Spst1g00024 460 SMART morn 295 316 IPR003409 -
Spst1g00024 460 SMART morn 203 224 IPR003409 -
Spst1g00024 460 SMART morn 226 247 IPR003409 -
Spst1g00024 460 SMART morn 341 362 IPR003409 -
Spst1g00024 460 SMART morn 272 293 IPR003409 -
Spst1g00024 460 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 199 295 - -
Spst1g00024 460 MobiDBLite consensus disorder prediction 1 34 - -
Spst1g00024 460 MobiDBLite consensus disorder prediction 12 26 - -
Spst1g00024 460 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 190 233 - -
Spst1g00024 460 Gene3D - 326 394 - -
Spst1g00024 460 Gene3D - 187 234 - -
Spst1g00024 460 Gene3D - 280 325 - -
Spst1g00024 460 Gene3D - 235 279 - -
Spst1g00024 460 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 269 373 - -
Spst1g00024 460 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 234 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00024 Spst-Chr1 366845 372480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00024 197 403 Acyl Lipid Metabolism Gene Families AT2G41210 33.810 1.36e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00024 - - gmx:102667330 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00024 1 366845 372480 Spst1g00024 1 366845 372480 ECH
Spst4g01225 4 46792413 46798034 Spst1g00024 1 366845 372480 PCT