Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01130 ATGTTTCAAAATCCTGACATGACAGCAACCGAGGAGAGAGCTACGCTGACGTGGCGGAAAATCCCCATCCTCAAATCCTCCCCCAGCGACGTCGTTCCTCCGCTCCGAAACGACGTCGTCCTCCGCTTCGTACCCGGAAGTGGCACACGCTATAAATTCGCAAGCGTGTCGGTGGCAGAAAGGAAATTCAACAGAGAATTTGCGCCGACGGCCGCTCAGCTTCTGAAGCACCCGGTCGCGCTGGTCGCATTGGTGCCTAAAGACGCCGCCCTGTTCCTCGCCGGCGCCATTGCCGGCGCTACCGCGAAATCCGTCACCGCCCCCCTCGACCGCATCAAGCTCCTCATGCAGACTCACGGCGTGCGAGTTGGACAAGAAAGTGCCAAGAAAGCGATTGGTTTGATTGAGGTATCCATTGCTAATCTTTGCATAGCTGGTCCCAAGCTTGGATATAAGGCATGGGTTGTGGCAATAACTGTAATAGGGAAGGAAGAAGGCGTAAAAGGTTATTGGAAGGGCAACCTCCCCCAGGTGATTAGGGTTATACCTTACAGTGCTGTCCAGCTATTTGCTTATGAAATTTACAAGAAAATATTCAAGGGAAAGGATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCAGGCGCTTTTGCTGGCATGACATCAACTTTTATAACTTACCCATTAGATGTCCTAAGATTACGATTAGCTGTTGAACCTGGTTATCGAACAATGTCAGAGGTGGCCTTGAGCATGCTAAAAGAGGAAGGATTTGCATCTTTTTACTATGGCCTTGGGCCTTCTCTCATCGGCATAGCTCCATATATTGCAGTGAACTTCTGTGTTTTTGATTTATTAAAGAAGTCGTTGCCAGAGAAATATCAGAAGAGAACTGAAACATCTCTACTCACTGCTGTACTTTCAGCATCTCTTGCCACGCTTACATGTTATCCTCTGGACACTGTGCGAAGACAAATGCAATTGAAGGGTACACCTTATAAGACAGTATTGGATGCCATTTCAGGTATTGTGGCACGCGATGGTGTTATTGGCTTGTATCGTGGATTTGTGCCCAATGCTTTGAAAAACCTACCAAATAGCAGCATCAGGCTTACTGCATACGACTTTGTGAAACGCCTAATTGCAGTCAGTGAGAAAGAGTTTCAAACAATTACAGAGGAAAACCGCAAGAATCAAAAGAAACCACAATAG 1212 0.4752 MFQNPDMTATEERATLTWRKIPILKSSPSDVVPPLRNDVVLRFVPGSGTRYKFASVSVAERKFNREFAPTAAQLLKHPVALVALVPKDAALFLAGAIAGATAKSVTAPLDRIKLLMQTHGVRVGQESAKKAIGLIEVSIANLCIAGPKLGYKAWVVAITVIGKEEGVKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFKGKDGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSEVALSMLKEEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTAYDFVKRLIAVSEKEFQTITEENRKNQKKPQ 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01130 403 PANTHER SOLUTE CARRIER FAMILY 25 78 381 - -
Spst4g01130 403 SUPERFAMILY Mitochondrial carrier 89 377 IPR023395 -
Spst4g01130 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 380 IPR018108 -
Spst4g01130 403 Gene3D Mitochondrial carrier domain 87 385 IPR023395 -
Spst4g01130 403 PRINTS Mitochondrial carrier protein signature 262 280 IPR002067 GO:0055085
Spst4g01130 403 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Spst4g01130 403 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085
Spst4g01130 403 PRINTS Mitochondrial carrier protein signature 91 104 IPR002067 GO:0055085
Spst4g01130 403 PRINTS Mitochondrial carrier protein signature 104 118 IPR002067 GO:0055085
Spst4g01130 403 FunFam Envelope ADP,ATP carrier protein 149 386 - -
Spst4g01130 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 198 IPR018108 -
Spst4g01130 403 Pfam Mitochondrial carrier protein 205 292 IPR018108 -
Spst4g01130 403 Pfam Mitochondrial carrier protein 300 382 IPR018108 -
Spst4g01130 403 Pfam Mitochondrial carrier protein 91 201 IPR018108 -
Spst4g01130 403 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 289 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01130 Spst-Chr4 44436647 44440196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01130 11 400 Organic Solute Cotransporters AT3G51870 66.499 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01130 K14684 - gmx:100796878 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03696 1 46715936 46716784 Spst4g01130 4 44436647 44440196 PCT