Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03696 ATGTCGAGTTTCATCAGAAAAAAGCGAGTCACTGACCTGCTCAACGACCAGGCCCGAGCCCGACTCGTCGGTGGCCATTACCGGAATTTGAACTCCTGCGACCAACTTTCTGGTGAGGGTGAGTCCCCCTCACTATCGTATCTCGTCCACGGTTTCCTTGAAGAAGACACTTGCGTCTGTAGCGAGGACTCAGTGTTCGATGACTCGGACTGTGACCGAGTCGACTCAGTAGACGACTCGTCCGACTCGGTGAGTGATTCATCCAGTGTCGCAATCTCACCTTCCATCACTACGGACCCTTACCGGAATTTACTCATTGCGCATGTTACTGAGGGCGCGGAGAAGTTCGCGTTTTTGAGGGAGCAAAACGCAATACTATACCGGCGGAACGTGGCGGCGTTTCTCCGGGAGAGGCGGCACGACGCGGCGGTGTGCGAGACGGCAGGGGATGCCTCAGGCGGGAGCCACGAGTTCATCGACGTGGTCCAGCCGGGAGCCGCCACTTGGCGGTACTTCGTGGACCTCGACTTCCGCGCGCAGTTCGAGGTTGCCAGGCCCACGCGACAGTTCGCGGAGGTGATGAACACCGTTCCCGGCATATTTGTCGGGCGCGCAGAGGAGCTGAAACGTACCGTTTCAACGCTATGCGACGCGTTGAGGCGGTGTTTCAGGAGCAGGGGGCTTCCAGTTCCGCCGTGGAGGAAGAACCGGTTCATGCAGAACAAGTGGTTCGGGCCGTGTCGTCGAACCATGGACCCGGTTCGGCTAGCTGTAAACGGTGTTAGTTGCAAGTTGGTGGGGTTCAACGACGTCGTTTTGGAAGCTGGACGTGTTGTTCGGACAAGATAA 849 0.5771 MSSFIRKKRVTDLLNDQARARLVGGHYRNLNSCDQLSGEGESPSLSYLVHGFLEEDTCVCSEDSVFDDSDCDRVDSVDDSSDSVSDSSSVAISPSITTDPYRNLLIAHVTEGAEKFAFLREQNAILYRRNVAAFLRERRHDAAVCETAGDASGGSHEFIDVVQPGAATWRYFVDLDFRAQFEVARPTRQFAEVMNTVPGIFVGRAEELKRTVSTLCDALRRCFRSRGLPVPPWRKNRFMQNKWFGPCRRTMDPVRLAVNGVSCKLVGFNDVVLEAGRVVRTR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03696 282 Pfam PDDEXK-like family of unknown function 47 249 IPR006502 -
Spst1g03696 282 NCBIfam uncharacterized plant-specific domain TIGR01615 128 250 IPR006502 -
Spst1g03696 282 PANTHER OS03G0796600 PROTEIN 36 255 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03696 Spst-Chr1 46715936 46716784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03696 - - gmx:100814756 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03696 1 46715936 46716784 Spst4g01130 4 44436647 44440196 PCT