Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00905 ATGGCAAACCTTAAGGTTGCATGCATGGTTGCGGTTGTATGCATGATTGTGGTGAGTTCACCGCTGGCACATGCGATTACGTGCACGGACGTCATCAGAAGCCTGACTCCATGCCTGGGCTACCTCAGGAGCGGCGGAAGCCCTCTGCCGGCATGCTGCAGCGGAGTGAGGGGCCTGAACTCCGCCGCTAAGACCACCGCTGACCGCCAGACCACGTGCAACTGCCTGAAATCCCTTGCCAATAATGGGTTAGGAAAGGGTCTCAACCCCAACATTGCAGCTTTACTCCCAGGCAAATGTGGCGTCAACATCCCCTACAAGATCAGCACCTCCACCAACTGTGCTACGTATGCTTCAGTCACCACCACACACTCCACTACATCTTTCCTTACACATTTGCTTTCACTACATCAAGTTCTGAAAGATGGGTGTGGTATGAGGAAGAAGAAGACACGCAGGGAAATTTTCCAGTGGAAGAATACTTACTATATATGA 495 0.5172 MANLKVACMVAVVCMIVVSSPLAHAITCTDVIRSLTPCLGYLRSGGSPLPACCSGVRGLNSAAKTTADRQTTCNCLKSLANNGLGKGLNPNIAALLPGKCGVNIPYKISTSTNCATYASVTTTHSTTSFLTHLLSLHQVLKDGCGMRKKKTRREIFQWKNTYYI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00905 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 116 IPR036312 -
Spst4g00905 164 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 PRINTS Plant phospholipid transfer protein signature 105 116 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 PRINTS Plant phospholipid transfer protein signature 87 104 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 5 115 IPR000528 GO:0006869|GO:0008289
Spst4g00905 164 Pfam Protease inhibitor/seed storage/LTP family 28 114 IPR016140 -
Spst4g00905 164 CDD nsLTP1 26 114 - -
Spst4g00905 164 Gene3D - 25 117 IPR036312 -
Spst4g00905 164 SMART aai_6 28 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00905 Spst-Chr4 38214710 38215946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00905 12 116 Acyl Lipid Metabolism Gene Families AT5G59310 57.143 6.55e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00905 - - gmx:100306510 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00850 1 10849461 10853728 Spst4g00905 4 38214710 38215946 PCT