Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00886 ATGCCGCTCTTCAAGTACCGCGTGAGGAATGAGTACAGCTTGGCGGATCCCGAGCTGTACCGTGCTGCCGACAAGGACGATCCCGAAGCGCTTCTTGAAGCCGTCGCTATGGCCGGTCTCGTCGGACTCTTGCGCCAGCTCGGCGATCTCGCCGAGTTTGCGGCTGAGATCTTCCATGATTTACATGAAGAAGTAATGGTTACTGCTGCAAGAGGCCATGGTCTTATGGCTCGTGTTAAGCAGCTTGAGGCTGAAGTTCCTTCTCTTGAGAAGGCTTTCTTTTCTCAAACTCATCACTCACCATTTTATACTAATGGAGGTATTGATTGGCATCCCAATCTAAGGACTGAACAAAATCTTGTGACTCGGGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGTCGTGGTCCTCCAAGACTGTTCCTTCTGGATAAGTATGAGCTGATTCATCAGACGTTTGATGTAGCAGGGGCTGGGGCATGCCTAAAGCGTTATACTGATCCATCATTCTTTAAAATAGAATCAACTTCATCTGTAAATACTACAATAGAAGTTCAGAGAGAGAAGAGAATTCGTAAAGTCAAGCTGAAGAAAGGAGCACGGCCGAGGGATGGTGAAGCTCCTAGTGTTGTACCATCACATTCAAAATTACATCAGCTTCTTCTTGAGGAGCGTATTGAAAACGGTTATAGTAATCCTGCACGACTAGTGAAGTTGAAAAAAAGACAAATGAATGGACCCGCAGTTGAAGCAAGGGCTGGTCAGAGTTACATGGAGAAATTTCTGGAAACTCCCTCACCTGATCAAAAAACAGTTTGTGAAACTTCAATCTTGCCATTGCATGTGAAATTGACATCAGATGATACTAGTGAGGCTGGGATTAAAGTTCTTGAAATTAGTAGCATTAGTCCTGTGAAAAAGTCAAAGGGAAACAAAAACACCTATTCATCCCCTGATGAGCAGGAATTAGAACTTAAACCATTTTCAGAAATGGATGGTGGGACGGATGAAGATCATGTGAAGGTGAAAGAACAAATCTCAGCTGGTGTGACAGATAATATGTCTTCTAATCATCGTAAGTTGCCTGATGAAGCAGAAATGGCTATTGATGAACGAAAGAAAATAGAAGGCAGCTTAGATGGGTATCATTCTGATGATTTGACTAGTGAAGTTGACAACTACATGGATGCTTTAACTACCATGGACTCAGAATTGGAAACAGACAATGAGTATAAACCTAAGAATAGTTTCTTGAATATTCAAAAGGAAACAAATACCAATGAAAAAGAAGAACATCAACTACAAGTTCATTTTTCAGATTCTCAATCACTTGGGGACTCTTCAATGTCTGATGACAGCAGTTCTTTCAGACAATATAGAAATGAAGAACAGATTAAAGTACAAGCTAAGTCGTCAGACTCTCAATCAACCGAAACATCCTCTTCATTAGACAATAATAGTTCACTCAGACAAGATAGAAATGGGCAGTATATAGAACCAGAAGCTCACCTCTCAGATTATCGATCTGTTGGAAACTCTTCAACATCATATGAAAATGATTTTTTCATGAAGAACAGATCCTATGTACCTCACTCTGATTTGTTAAGTGCCATGGTTGAGAATACACAATCAGAACCTTTATTATTCACAAATGCTAAGTATTATGAATCGGTGGTTGAAGATGCACCATCCAACCAGCTTCCTCAAAATGTTGAGTTTCAACGCACAGATTGTGGGAGGTCTGTTATGCATGATGATGCACCTGTTAATGAAGAAGAGATTTCTGATTTGGGGCAAGCCTGTTTCGATATGACGACTTCAGGACAGGGTTTGTGTTTTGATATTGGGTCCACCTCTCCAGTGATCCTAACTGCAGGAACTCAATCAGATGGAACCTCATCTGACCCTGTTGAACTTAATTTAATATTAGAGGGTGATGATGCCGGCAGAACAAGAGATGTTGATGATAATGATGATGCAAGCAAAACAAGTGATGAAGTTGCAGACAGAACAGGTCTTGTTGAATCTGTTACTTCCAAATCTGTTTCTCTCTCCCTAATAAAAGACAATGCTTGTCCCATGGATTCTTCTGATAAAACATCATTAGAGATAGACAACTTGGATGTTGATGATTCATTTATTCACTCTGATGATTTGTTACAAGTTTCTAATGATTTAGAATTTGCTCATGAAGATGAATGCAATTCTCATTCTGAAATAAAAATGTTCCAACCAGGACCTACCAATGAAAACACTTCCGAAATTTTGGTTAATAGAGGTATTGATTCACCGGAAGTGGATCCTGTTTTCCCATCCACAGAAGAACTAAAAGTGAATTCAGATGACTCAAAAGGTGAAGGTTGTACTACAGCAACCCAACTTAATTCAGAGACTGCTGTTGTTAAGATTCCTCCAATGTGCTACTTTACTGGAGAGCTATCCTTTGACACAATTCATAATAGTACTCAGGAGGAACCAGGCTCAGGAATAATTGAAGTTTCAAATTATGATCTGCCATTGGAAGTTGACGAGGTACCAATGGTGGTGCATGAAGATGAAATAAATGGATCAACCTGCAGGGTCGATCCAGTTGTAGGTGATGGTCATTTTAAACATCCATCTCCTGATAATCATGTGATGATAAATGATCTGGCCAGTGAAAATGTTCAGTCAGAAGATCAAGCTGTATATTCTATACCTTCTGTTGATAGTGCTGAAAATGAAAATGGCGTGGGTGTCGTTACTTGTCAAGTTTCAAGTCAGATTTCTACTTCAAGGGGTCTTTCAGATTTGGAAGAACCTCTGTTGAATTCTCATTCTTATAAAATGGGCTTGAAATCCAATGAAGTGGAATTCACGCAAATTGCCATGGACACAAATGCAGAAAAGAATGAGGATCAATTGGCACCAGTGATCGATGTAACGTCATCTGATGTAATAAATTCTCCGATGAGTAATATTACAAAGTTGGAAGAATCTCTTCCTACTTTTTCAGATTCACAGAAGAAAGAGATGGAAGTTGACGATAAAGTTGCTGGAGAATTTTTGACAGAACTAGAGGAACAGAAGATAGTGGATCAACCAGAAAGCGCTTCTGTGTATGCACCATTGAACCTGAAAACACCGGTTCCTTGTGATCTTCCAGATTCAGAAACATGTAATATTCAAAAGTTCCATAATAGTGCATTTGTTGATGATGCAGAAACGGTGCCTGAATTTTCAGGGTTGGATGCCCAGCAGTCAGAATCAATATTTAATGGCCAGCATGATCCATTACTAAATGGCAGAGATAGTTTTTCATCACCTTCTGGTAACCAGTTGGAACCTAAAATTGATTTAGATCTGTACTCAAAATCCCAAATTGGTGAACAGGATGCAGAATATCCACCCAGAGATGAAAGAAACTTTGCCTCTAAGAAATCTCAATATCAGCAGTTGCAGATATATCAATTAGAGCAAGAAAGCAATCATACTACTTCTGAATGTGTATCAGAAATACGTGCAGATGAGCCATCACCGTTTTATTCCTTGCCACAGTCATTTAGCCAGAATGCTGCAAAACATGCCATGGATCCATTGATGCCTCTTCTTCCTAACCTCTTTCCAAAGGCAACTGAAAATAATCTTGATGAGATGCCACCTATGCCACCTCTACCACCTATGCAATGGAGAATGGGAAAGATTCAACATACTTCCCTAGCTTCACAAAGAGAAGAATTAGAAGTAACTCAGGCCTCAGTTCAGCCAATTATGCCTGATAAAAAATTACTATTTGGTCTGCCAACTTCTAAGAGAGAGACCTCGTTGTATCAGAGTCCATTTTTGCCTGTCATGGCTGTGGAAAGTGATAAGCTCCAACTTTCTTCTGGGTTTCCTGTTGGTGTTTCAGGGCATCCTGTTGCTATACCTTTTCAATTTCCTATCATGGTTAATGAATCAAAAGGTCAATATAATTACCTATTGCTGGATAGAAACCAAATTCAGAATCCCTTCTTAACATTACCAGTGGCATCTACAACAATGCATCCTCATGATCTTATTGTTGCTCCTGAGGAAAAACTGATGCAGCATCAGTTAATGGTGGAGACTACTTCAGATGATAAATCACTTCAACAGAGTATGACTAATATGGTATCTATGGACAGGCCTCCAAATGGTCATACAGTTGCTTCTGAGGGAGAAATTGTACTGAATTCAAACCCTTGCCCTACAGTTTCACCTGCTGAATGTGCCATTTCTGGACATGAGTCCGTTTCACCTCAAGAAAAACTGCTTCAACCTCCAAATCAATTGATGATGGAGCCTAGTTCAGATGATAAAACACTTCAGCTGTCTGTTACTAATGGTTTATCTATGGACAGTCCTCACAGTCACATTGTTGCTTCTGATGGAGAAATGGAACGAAGTTGTAATCAAGACCCAACAATTCAACCTGTTGAATGTGCTGTTCCAGGGCTTGGACATGATTCTATCTCTTCTCAAGAAAACTCGATTCAACCTCCTAGTCAATTAATGTCAGGAACTAGTTCTGAAGTTAACATCATTCAGGAGTCTATCCGTAATTTGGAAGGGGAACAAGGACGTTTGCCTATCTCATTCAAGCCTCCACCAAACATGGAAAGGATGGAGCCTAATCAGAGTTTCCTGCCCTATGAGGGGGGAGTCGCAACGTCCTCGGATACACCTGATCATGCTTCAGATATTGAGAGTGAAATGATAAATGGAAAACCAAAGAATAAGCTTCCTCGTCCTCGAAATCCTCTAATTGATGCTGTTGCGGCTCATGACAAAAGCAAGCTTAGAAGGGTTACTGAACGGGTCATGCCTCAAATTGCACCGAAGGTAGATGAAAGAGATTCTTTACTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTGCTGTGACTACACGACCTAGCATTCAAGGTCCAAAAACAAATTTGAAGCTTGCAGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGACGATGCGGATTGGAGCGATTCTTGA 5049 0.4032 MPLFKYRVRNEYSLADPELYRAADKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMVTAARGHGLMARVKQLEAEVPSLEKAFFSQTHHSPFYTNGGIDWHPNLRTEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKYELIHQTFDVAGAGACLKRYTDPSFFKIESTSSVNTTIEVQREKRIRKVKLKKGARPRDGEAPSVVPSHSKLHQLLLEERIENGYSNPARLVKLKKRQMNGPAVEARAGQSYMEKFLETPSPDQKTVCETSILPLHVKLTSDDTSEAGIKVLEISSISPVKKSKGNKNTYSSPDEQELELKPFSEMDGGTDEDHVKVKEQISAGVTDNMSSNHRKLPDEAEMAIDERKKIEGSLDGYHSDDLTSEVDNYMDALTTMDSELETDNEYKPKNSFLNIQKETNTNEKEEHQLQVHFSDSQSLGDSSMSDDSSSFRQYRNEEQIKVQAKSSDSQSTETSSSLDNNSSLRQDRNGQYIEPEAHLSDYRSVGNSSTSYENDFFMKNRSYVPHSDLLSAMVENTQSEPLLFTNAKYYESVVEDAPSNQLPQNVEFQRTDCGRSVMHDDAPVNEEEISDLGQACFDMTTSGQGLCFDIGSTSPVILTAGTQSDGTSSDPVELNLILEGDDAGRTRDVDDNDDASKTSDEVADRTGLVESVTSKSVSLSLIKDNACPMDSSDKTSLEIDNLDVDDSFIHSDDLLQVSNDLEFAHEDECNSHSEIKMFQPGPTNENTSEILVNRGIDSPEVDPVFPSTEELKVNSDDSKGEGCTTATQLNSETAVVKIPPMCYFTGELSFDTIHNSTQEEPGSGIIEVSNYDLPLEVDEVPMVVHEDEINGSTCRVDPVVGDGHFKHPSPDNHVMINDLASENVQSEDQAVYSIPSVDSAENENGVGVVTCQVSSQISTSRGLSDLEEPLLNSHSYKMGLKSNEVEFTQIAMDTNAEKNEDQLAPVIDVTSSDVINSPMSNITKLEESLPTFSDSQKKEMEVDDKVAGEFLTELEEQKIVDQPESASVYAPLNLKTPVPCDLPDSETCNIQKFHNSAFVDDAETVPEFSGLDAQQSESIFNGQHDPLLNGRDSFSSPSGNQLEPKIDLDLYSKSQIGEQDAEYPPRDERNFASKKSQYQQLQIYQLEQESNHTTSECVSEIRADEPSPFYSLPQSFSQNAAKHAMDPLMPLLPNLFPKATENNLDEMPPMPPLPPMQWRMGKIQHTSLASQREELEVTQASVQPIMPDKKLLFGLPTSKRETSLYQSPFLPVMAVESDKLQLSSGFPVGVSGHPVAIPFQFPIMVNESKGQYNYLLLDRNQIQNPFLTLPVASTTMHPHDLIVAPEEKLMQHQLMVETTSDDKSLQQSMTNMVSMDRPPNGHTVASEGEIVLNSNPCPTVSPAECAISGHESVSPQEKLLQPPNQLMMEPSSDDKTLQLSVTNGLSMDSPHSHIVASDGEMERSCNQDPTIQPVECAVPGLGHDSISSQENSIQPPSQLMSGTSSEVNIIQESIRNLEGEQGRLPISFKPPPNMERMEPNQSFLPYEGGVATSSDTPDHASDIESEMINGKPKNKLPRPRNPLIDAVAAHDKSKLRRVTERVMPQIAPKVDERDSLLEQIRTKSFNLKPAVTTRPSIQGPKTNLKLAAILEKANAIRQALAGSDEDDDADWSDS 1682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00886 1682 Gene3D - 1 90 - -
Spst4g00886 1682 MobiDBLite consensus disorder prediction 440 458 - -
Spst4g00886 1682 MobiDBLite consensus disorder prediction 1089 1110 - -
Spst4g00886 1682 ProSiteProfiles WH2 domain profile. 1620 1638 IPR003124 GO:0003779
Spst4g00886 1682 MobiDBLite consensus disorder prediction 430 495 - -
Spst4g00886 1682 MobiDBLite consensus disorder prediction 648 672 - -
Spst4g00886 1682 MobiDBLite consensus disorder prediction 471 495 - -
Spst4g00886 1682 Gene3D - 104 221 - -
Spst4g00886 1682 Gene3D - 1590 1681 - -
Spst4g00886 1682 PANTHER WASP-1 1 1681 IPR028288 GO:0005856|GO:0030036
Spst4g00886 1682 MobiDBLite consensus disorder prediction 647 672 - -
Spst4g00886 1682 MobiDBLite consensus disorder prediction 1089 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00886 Spst-Chr4 37378387 37385443 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00886 - - var:108347390 2371.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00827 1 10486531 10498074 Spst4g00886 4 37378387 37385443 PCT