Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00827 ATGAAGTACATGCCAAAAGACCATTGTCAAATGCTTCCATTCGCTGCTACTGTATTGCGCTTCTGGTCCCAAACAGTAGTTCAGTTGGTGGGTCCAAAAATACCAATTCAGTCTTGGGAAGGTGAAAACACCACATTGAAGGTCACCAACCAGAGATTTGTGGGACAGAAGAGGGAAAGAGACGTCACCGGAGCGGAGATCAGAAAACGCCACCGGCACATAGAAACCGGACCGGGACTAGAATCTCGGAAAATGCCACTCTGCAGGTACCACATTCGGAGCGTACACGCTCTGACGAATCCGGAGCTGCACCGCGCCGCCGATAGTGACGACTCCGAAGCGCTTCTCGAAGCCGTTGCAATGGCCGGACTCGTCGGCTTTCTCCGCCAGCTTGGCGACCTCGCTCAGTCAGTTCACTTTCTATCTCTAATTTCTCTCTCCGTAATCGCTTCCGTCGTGGCGCGGTTAAGCAATTCTAGTTGCGCTCAAGGTTTCCTTGATCGAGCTGAGTTTAAAATGAATGTTGCTGAATTTGCTGCTGAGATGTTCCATGACTTACATGAAGAGGTATTGGCTACTGCGGCAAGAGGTCACAGTCTTATATCTCGTGTTCAACAGCTTGAGGCTGAAGTTCCAGCACTTGATAAAGCTTTTTTGTCACAAACACATCATTCATCAATCTATACAAATGGAGGGATTGAATGGCATCCTAATCTTCGGTTTGAACAGAATCTTGTTACTCGCGGAGACTTACCTCGATTTATAATGGATTCATATGAAGAATGCCGTGGTCCTCCAAGATTGTTCCTTCTGGACAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAGCGTTATACCGATCCATCGTTCTTTACAGTGAAGTCTGCTTCCTCTGGAACAGCATCAGCAGAAGTTCAAAGGGAAAATAAAATTCGTAAAATTAAGCAAAAGAAAGGAACACGACTGAGGAATGGTGAAACCCCTGAAGTTGTATCATCACATGCAAAATTGCATGAGTTGTTACTCGAGGAGCGTATTGAGAATGCTTGTAGGGACCCTGCTCGACTAGTGAAGTTGAAAAATAAACAATTGAATGGATCTGCAGTTGAAGAAAAATCTGGAAAAAGTTACATGGAGAAAATTCTGGAAATCCCCTCACCTGATCATAAACTGGTTTGTGAAACGTCAATCATTCCACAGCCTGGGAAATTGGCATTAGATGACACTGAAAGTGGGATTAAAACTCTTGAAGTCAGTAGCATAACTCCGTTGAATAGGTCTTTGGGAAATGAAAACATGTGTTCAACACCAAATGAGCCGGAACTAGAACTGAATTCCTACACAGAAATGGATAGGGAAACAGATCCACATATTGTGGAGGTGAATGAACAAGTCTCTGGTGGTTTAACACAGGAAATGTCTTCAACTTATCTAAAGGTAATTGATGAAGCAGAATTGGTGTTTGATGAACAAAATAAAAGAGAATGTAGCTTAGATAGCTACCACTCTTCTGATGTGACTAGCGAGGTTGATGATTATATGGATGCATTAGCTACCATGGAGTCTGAATTGGAAACAGATAATGAGTATGGACCTATGAAAAACTTATTAAATATTCAAAATTTAACTGATTTAAATGGCAAAGGAGAATCTCAAATGCAAGCTCAGTTTTCAGATTCTCAATCATTTGGAGACTCTTCAACTTCTGAAGAAATTAGTTCATTTGAGCAAGATAGAATTGGAGAGAATAATGAAGGACAAGGTCTGTCGTTAGATTCTCCTTCAACAGGAACCTCCTGGGCATCCGATGATAATAGTTCATTCAGAAGAGTTAGAAATGCAGAGCATTCAGAACTACAGGTACGGCTTTCAGATTTTCCAACTATGGGAAACTCCAAATCGCAGATTGAAAGTATGCCATCCAACATGCTTCCCCCAACTTTTGAGTTGCAAAGGACTAATTGTCGCGAGTTTGTCATGCATGGTGATGCTCATGTTCAGGGTGAAGTGATTTCTGATTCTATACCAGTCTCTTCTGGTCTGATAGATTCTGAACATTCATTGGTGTCTTACGATCTTGGAGCTGCCTACCTAGCGTCCCTACCTGCACAGAGTCACTCAGATGAAACACCATATGACCCTGCTGAAGTTCATTTAAGAATAGAAGATGATGAAGAAAAGGAGTGCCTTGTTGAATCTATAGTCGCCAGACCCGATGCTCTCTACCTAATAAGAGATGATGCTTGCCCAGTGGTTTCTTGTGATAACAATCCTTTGAACAATTTGAATGTCTGTGATCCTTATGGCCATTCTAATGCTCTATTACAAGTTTCTAATGAATTAAACTTAGCTCATGAAGGTGAATGTGGTGATCCTTCTGAGATTGAAGTTTTGCAGGAAGAATCTCTCAATGAATACTCTTCTGAAATGTTGGTTTGTGAAGATGTTGATATTCATGGGGACGATCCGACTTGCCTATCTGTGGAAGTAGACCTGAATCCAGGTACTAAGCTATTGCTTGATGGCCGAGATTTCAAATATGAGGATGATATCATAGCTACCAAGCTGAACTCAGAAGATCTGTTTCCTGTTGCGGAGACTACACCAAAGTGTTGTTTTACAGAGGAGCTATGCGCTGATTTTACACACGGAAACAAACCAGATTTTGCAGAAATTGACGTTCTGCATCCTGATCAGCAAGGAAATTTCAAAGAGGTGCCAAGGATATTGGGTGGTCACGAAACAAATGGATCAACCTGCAGTTTGGATCTAGTTGAAGACGATGGTCATATTGAACATCCATCTTCAGATATAATATCATCTTCAATGAGTAATCTAACGAAGTTGGAAGAATCTCTTTCTATTTTTGCAGATCCTCATCAGAAAGAGACGAAAGTCAATGAGGCAGATAGTAGAGAATTTTCGACAGAATTAGCAGCCCAGAGGGTAGTGGATCAAGTAGTTATTGCTTCGACTGGATTTCCGTCAAACATGAATAGATCAGTTCCATTTGATCCTTCCGATTCTGAAATGTGGAATAATAATCAGCATTCATCTCTTAGGGAGAAAATTCAATATAGCTCTTCGATCAATGACCTGAAAACATTGCCTGTTTGTTTGGATCTAAACTCTCAAAGGTCATCTGATCAACGAATTAGCCCAACAAAACATGTCATGGATCCACCAAAACCACTTATTTATGACTTATTACTTAAGGCAACTAAAAACAATCTCGAGGAGATGCCACCTATGCCCCCGCTACCACCAATGCAATGGAGAACGGGCAAGATTCAAAATGGTTTCCTAGTTACAGAGAGAGAAGTAAGTCTAGCCTCACTCCTATCAACACAGCCAAATAAACCTGATGACAAGTCTCATTTTGGTTTATCAACTTCTGAAAAAGAGAGCCAGTCATATCAGGATCTATTTTTACCTGCCATGGCTATGGAAAGCAATAGGCATCAACATTGTTCTGGGGTTTCTGTGGGAATTTCAGATTATCCTGTTGCTATTCCTTTTCAATTTCCTGTAATGTTAAATGAACCAAATGGTCAATATAATTTCCTGGTTCCAGAGCAAAGCCAGATACAGAACCCTTTCTTAACATTACAGGACAAGCCTCCACTTGGATATGTTGTTGCTTCGGAGGGAGAAATGGCATTCAATTCTAGTTCATACTCATCAACACTGCCTGATGTGTGTGCTATTTCTGGGGCTGATCCCATTGCCAGCTTAGAAGTTAAAATGGATTTGGTGCTACCTGAAGAATGTCCTGTTTCTGCAGATGATCCCGTTCCTCCAAAAGAGAAACTAACACAACCTTCAAGTCAGTTGAGGGAAGAGACTAGTTTAGAAGTTGAAATTCCTAAGCAGTCTTCAATTAATCTGGAAGAGAGGATACAAGAAGATACTTCAATCTCACCCATGTCGCCTCCGAGTCCAGGAATTGAGCAGACCAATCACAATCTGCCGCCTTCAGAGGGAAAAATGGCGTTTCCCCAAGCATCCGAGCGTGATACTAAGATGCTAGATGGAAAACCAAAGAATAAGCGTCCTCTCCCCCAAGATCCTATAATTGATCCTGTTGCTGCTCTAGACAAAAGCAGGCTGAGGAAGGTCACTGAACGGGTTATGCCCCCCAGAGCACCAAAGGGTGATGAAAGAGACTCACTGTTAGAAATGATAAGAACGAAGTCCTTCAACTTGAGGCCTGCTGCGGTTAACCGACAACCCAGCATCCAGGGTCCGAAAACGAACTTGAGGGTTGCTGCCATCCTGGAAAAAGCAAATGCAATTCGTCAGGCATTGGCTGGAAGTGATGAAGATGACGATGCAGATAGTTGGAGTGATTCATGA 4359 0.4223 MKYMPKDHCQMLPFAATVLRFWSQTVVQLVGPKIPIQSWEGENTTLKVTNQRFVGQKRERDVTGAEIRKRHRHIETGPGLESRKMPLCRYHIRSVHALTNPELHRAADSDDSEALLEAVAMAGLVGFLRQLGDLAQSVHFLSLISLSVIASVVARLSNSSCAQGFLDRAEFKMNVAEFAAEMFHDLHEEVLATAARGHSLISRVQQLEAEVPALDKAFLSQTHHSSIYTNGGIEWHPNLRFEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFTVKSASSGTASAEVQRENKIRKIKQKKGTRLRNGETPEVVSSHAKLHELLLEERIENACRDPARLVKLKNKQLNGSAVEEKSGKSYMEKILEIPSPDHKLVCETSIIPQPGKLALDDTESGIKTLEVSSITPLNRSLGNENMCSTPNEPELELNSYTEMDRETDPHIVEVNEQVSGGLTQEMSSTYLKVIDEAELVFDEQNKRECSLDSYHSSDVTSEVDDYMDALATMESELETDNEYGPMKNLLNIQNLTDLNGKGESQMQAQFSDSQSFGDSSTSEEISSFEQDRIGENNEGQGLSLDSPSTGTSWASDDNSSFRRVRNAEHSELQVRLSDFPTMGNSKSQIESMPSNMLPPTFELQRTNCREFVMHGDAHVQGEVISDSIPVSSGLIDSEHSLVSYDLGAAYLASLPAQSHSDETPYDPAEVHLRIEDDEEKECLVESIVARPDALYLIRDDACPVVSCDNNPLNNLNVCDPYGHSNALLQVSNELNLAHEGECGDPSEIEVLQEESLNEYSSEMLVCEDVDIHGDDPTCLSVEVDLNPGTKLLLDGRDFKYEDDIIATKLNSEDLFPVAETTPKCCFTEELCADFTHGNKPDFAEIDVLHPDQQGNFKEVPRILGGHETNGSTCSLDLVEDDGHIEHPSSDIISSSMSNLTKLEESLSIFADPHQKETKVNEADSREFSTELAAQRVVDQVVIASTGFPSNMNRSVPFDPSDSEMWNNNQHSSLREKIQYSSSINDLKTLPVCLDLNSQRSSDQRISPTKHVMDPPKPLIYDLLLKATKNNLEEMPPMPPLPPMQWRTGKIQNGFLVTEREVSLASLLSTQPNKPDDKSHFGLSTSEKESQSYQDLFLPAMAMESNRHQHCSGVSVGISDYPVAIPFQFPVMLNEPNGQYNFLVPEQSQIQNPFLTLQDKPPLGYVVASEGEMAFNSSSYSSTLPDVCAISGADPIASLEVKMDLVLPEECPVSADDPVPPKEKLTQPSSQLREETSLEVEIPKQSSINLEERIQEDTSISPMSPPSPGIEQTNHNLPPSEGKMAFPQASERDTKMLDGKPKNKRPLPQDPIIDPVAALDKSRLRKVTERVMPPRAPKGDERDSLLEMIRTKSFNLRPAAVNRQPSIQGPKTNLRVAAILEKANAIRQALAGSDEDDDADSWSDS 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1366 1392 - -
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1340 1354 - -
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1271 1289 - -
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1303 1326 - -
Spst1g00827 1452 PANTHER WASP-1 85 1451 IPR028288 GO:0005856|GO:0030036
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1259 1289 - -
Spst1g00827 1452 MobiDBLite consensus disorder prediction 1303 1392 - -
Spst1g00827 1452 Gene3D - 227 362 - -
Spst1g00827 1452 Gene3D - 1363 1451 - -
Spst1g00827 1452 Gene3D - 85 216 - -
Spst1g00827 1452 MobiDBLite consensus disorder prediction 549 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00827 Spst-Chr1 10486531 10498074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00827 - - gmx:100775755 1835.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00827 1 10486531 10498074 Spst1g00827 1 10486531 10498074 ECH
Spst1g00827 1 10486531 10498074 Spst4g00886 4 37378387 37385443 PCT