Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00863 ATGAAGGTAGGATCTGGTAAAGGGAGAAAAGTGTGCCTTACGGTGACAGGTGTTGTGATTGCAATAGTACTGCTAATTGTGATACTAGCTTTGACTGTGTTCAAAGCCAAGCATCCTGTTATCACTGTGGACTCGACGAAGCTAGAAGATTTTCACATGAGTTTGGATATAGCAAAGCTAAGGGTAGATTTGAATGTGACTCTTGGCACAGATGTCTCAGTGAAGAACCCGAACAAGGTTGGATTCAAGTATTCTGACAGCACTGCTCACCTCAATTACAGAGGGCAGTTGATAGGTGAAGTCCCTGTCCCTGCTGGAGAGATTTCATCTGGTGAGACCAAAGGATTCAACCTCACCCTCACCATTATGGCTGACCGATTGCTCTCCAATTCCCAGCTTTTCTCTGATGTCACATCTGGCACATTGCCCCTAAACACTTTCGTGAGGATTTCTGGCAAAGTCAGCATCTTAGGTTTTATCAAAGTCCATGTGGTTACCTCCACATCTTGTGATGTTGCAATTAATCTTTCTAATAGAACAATTGGGAACCAAGAGTGCCAATACAAGACAAAACTTTGA 579 0.4335 MKVGSGKGRKVCLTVTGVVIAIVLLIVILALTVFKAKHPVITVDSTKLEDFHMSLDIAKLRVDLNVTLGTDVSVKNPNKVGFKYSDSTAHLNYRGQLIGEVPVPAGEISSGETKGFNLTLTIMADRLLSNSQLFSDVTSGTLPLNTFVRISGKVSILGFIKVHVVTSTSCDVAINLSNRTIGNQECQYKTKL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00863 192 Gene3D - 27 174 - -
Spst4g00863 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 187 - -
Spst4g00863 192 Pfam Late embryogenesis abundant protein 72 165 IPR004864 -
Spst4g00863 192 SUPERFAMILY LEA14-like 29 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00863 Spst-Chr4 36398396 36398974 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00863 - - gmx:100811806 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00933 1 11512299 11512892 Spst4g00863 4 36398396 36398974 PCT