Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00933 ATGAAACGGGGATCTGGCAGCAAAGGCGGAAAGATCACGTGCCTGGTGGTAACATTATGTGCAGTGATCTTAGTTTTGTTGCTGTTGGTGCTCTTAGCATTTACAGTGCTCAAACCACACCAACCTATTAGCACAGTGGACAGCATACAGATTGAGGACATGAACTTGAGCATGGACATATTCGAGATGAGTATAGATGTGAATGTGACATTGGAAGTGGATGTTTCAATTTACAACAGAAACAAGTTTGGATTCGAATACCATAATAGCTCTGCACAACTCTTCTACAAGGAGGAATTGATTGGGGAAGGCCCTATCCCCAATGGAGAGATTTTAGCAGAGGAGACTAAAGGCATGAACTTGACACTCACTATTATGGCTGACCGTTTGGTCTCCAATAGTGAGATCAAAAACGATGTTGCATCAGGTTCAATCCCCCTAAACACCATAGTGAGAATGTTTGGCACCGTCAAAGTCTTGGGCTTTATCAAATTCGACGTGGCTTCTACCTCATCTTGTGATTTCAACCTCGACATTTCCTCTAGAAAAGTTGTGAACAATAACTGCATATCCAAGACAAAGGTTTCAGGTTGA 594 0.4242 MKRGSGSKGGKITCLVVTLCAVILVLLLLVLLAFTVLKPHQPISTVDSIQIEDMNLSMDIFEMSIDVNVTLEVDVSIYNRNKFGFEYHNSSAQLFYKEELIGEGPIPNGEILAEETKGMNLTLTIMADRLVSNSEIKNDVASGSIPLNTIVRMFGTVKVLGFIKFDVASTSSCDFNLDISSRKVVNNNCISKTKVSG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00933 197 SUPERFAMILY LEA14-like 23 133 - -
Spst1g00933 197 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 9 180 - -
Spst1g00933 197 Pfam Late embryogenesis abundant protein 75 173 IPR004864 -
Spst1g00933 197 Gene3D - 31 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00933 Spst-Chr1 11512299 11512892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00933 - - vun:114185991 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00933 1 11512299 11512892 Spst4g00863 4 36398396 36398974 PCT