Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00855 ATGTCGGGTCTCTACAATTCCAACTTCTCTCCGGTCAGAGCTGCTTCTCCTCAGATTCGAACCAACCCAGAAGTTGACAGTCAGTATCTTACGGAGTTGCTGGCAGAGCATCAGAAGCTTGGTCCCTTCATGCAAGCCCTTCCCATTTGCACTCGTCTCTTGAATCAAGAAATATTAAGAGTTTCTGGATTGCTGTCCAATCAAGGTTTTGGTGACTTTGATAGACTGCGGCATAGAAGCCCTAGTCCAATGGCTTCTTCAAACCTCATGTCAACTGGAACTGGGTTGGGTGGATGGAATAGTCTTCAGCAAGAGAGGTTACGTGGAACTCCTGGAATGACAATGGACTGGCAAGTTGCACCAGCAAGTCCTAGTTCATATACAGTTAAGAGGATTTTGCGCTTGGAAATTCCAGTTGATACATATCCCAATTTCAATTTTGTTGGAAGGCTTCTGGGACCCAGGGGCAATTCTCTGAAAAGGGTGGAAGCTTCTACAGGTTGTCGGGTGTATATTAGAGGAAAGGGTTCAATAAAAGATCCAGACAAGGAAGAAAAATTAAGAGGAAGACCAGGTTATGAGCATCTCAATGAGCCACTCCATATCTTGATTGAGGCTGATTTACCTGCTAATATTGTTGACATAAGGCTCCGACAGGCTCAGGAAATTATAGAAGAATTGCTCAAACCTGTGGATGAGTCTGAGGACTATATCAAGAGGCAGCAGTTACGTGAATTGGCGATGCTGAATTCAAATTTCAGAGAAGAGAGTCCTGGACCAAGTGGAAGTGTATCTCCATTCAATTCCAGTGGAATGAAACGGGCTAAAACTGGTCGATGA 840 0.444 MSGLYNSNFSPVRAASPQIRTNPEVDSQYLTELLAEHQKLGPFMQALPICTRLLNQEILRVSGLLSNQGFGDFDRLRHRSPSPMASSNLMSTGTGLGGWNSLQQERLRGTPGMTMDWQVAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEASTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESEDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00855 279 PANTHER RNA-BINDING PROTEIN RELATED 22 270 IPR045071 -
Spst4g00855 279 MobiDBLite consensus disorder prediction 1 20 - -
Spst4g00855 279 MobiDBLite consensus disorder prediction 254 279 - -
Spst4g00855 279 SMART kh_6 129 229 IPR004087 GO:0003676
Spst4g00855 279 ProSiteProfiles Type-1 KH domain profile. 146 203 - -
Spst4g00855 279 Pfam KH domain 146 182 IPR004088 GO:0003723
Spst4g00855 279 MobiDBLite consensus disorder prediction 253 279 - -
Spst4g00855 279 Pfam Homodimerisation region of STAR domain protein 23 72 IPR032377 -
Spst4g00855 279 Gene3D K Homology domain, type 1 19 260 IPR036612 GO:0003723
Spst4g00855 279 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 136 254 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00855 Spst-Chr4 36309224 36315251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00855 K14945 - gmx:100791899 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00922 1 11444331 11455581 Spst4g00855 4 36309224 36315251 PCT