Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00853 ATGGCTCCTAATCCGAGGCCCAAGTTGCGTGTTCCATTCTTCATGTTACTGCTGATGCTTGTTTCCTTTGGTTGTTCCAACGCTGAATGGGAACAGAAGCCCGGAGCTGCTATACATAAGAATGTGATTGATGGCTCTGGTGTGGAGAATTCCCTCAAGTTCGAGGAAATCAATGGCAGAAAAGGTGGTGGCAGTAGTAGAGTTTCGGTTTCCACGGTTGCATTGTTCACATTAGCAATGGCAGCTGCCACTGGTTTAGGTGCTGTTCCCTTCTTCTTTGTGGAGCTTGATCCACAATGGGCAGGGTTGTGTAATGGAATGGCAGCTGGTGTCATGTTGGCTGCAAGCTTCGATCTCATACAGGAAGGTCAATATTATGGTGCTGGAAATTGGGTTGTCATTGGGATTCTAGCTGGTGGCATCTTTATTTGGTTCTGTAAGAAGCTTCTTGAGCAATATGAGGAAGTAAGCATGTTGGATATAAAGGGTGCTGATGCAACCAAAGTTGTTCTTGTAATTGGAATAATGACTCTACATTCTTTTGGGGAAGGATCTGGGGTTGGGGTCTCCTTTGCTGGTTCAAAGGGTTTCTCTCAAGGCTTATTGGTAACTTTGGCTATTGCTGTACATAACATTCCAGAGGGATTGGCTGTGAGCATGGTGCTGGCATCAAGGGGTGTCTCTCCACAGAATGCTATGTTGTGGAGCATTATTACATCGTTACCTCAGCCAATTGTAGCCGTTCCTTCATTTATTTGTGCTGATGCATTCAGTAAGTTCCTGCCTTTTTGTACTGGGTTCGCTGCTGGATGCATGATCTGGATGGTTGTTGCAGAAGTGCTTCCTGATGCATTCAAGGAAGCCTCTGCTTCTCAAGTTGCATCGGCTGCAACACTTTCAGTAGCATCTATGGAAGCTCTAAGCACCCTTTTTCAGAATTTCTACCGTGACTACAGCTCTCAGGATGCTTCTGGCTTCTTTGTTTCATTACTTTTTGGGCTTGGCCCATTACTTGGTGGTATTATTCTGGTTGTATTTGCTCTTGCACTTCGTCTTCCGCATGCTCTCCTGATGGGCATAGCATGTGGTATTGCCTTTGTTCTTGGTGCCTGGCGACCAGTGCAGCTTATTTTGTCTTCAAAGTTAGGATTTTTTCCTGTTGTGTTACTCCTTGCAATGGGTGCTGCTTTCATCCATGTTTCCAGCTCTGGTGTACTGAAGGTGGCAGCACGCAAGAAAACCTCGGCCACTGACTTGCCTACTCTTATAGGCTTCCCAGTGAGTGTTCAAACCCTTCAATCATTCATATTATGCGGTGCTGTTGCTCTACATGCTTTGGCTGAAGGACTTGCACTGGGAGTAGCTGCACCAAAAGCTTATGGATTTGGTCGTCACATCGTCCTTCCAGTCTCTCTACATGGTCTCCCTCGAGGTGCTGCTGTTGCTAGCTGCATCTATGGTTCTACTGATAGTTGGCATGGTTCTCTTGCAACAGCTGCCATAATTGGATTTATGGGTCCTATAGCAGCAATTGGATCTATTCTTGCTGGGATTGATTACAGTGGCCTTGATCACATAATGGTCCTGGCTTCTGGTGGAATAATTCTAAGTTTTGGAAATGTATTTAATAGAGCACTTAGCTTGGACAAGAAAAAGAGCACATGTGGCCTCGTTATGGGAATTGGGTTTGCTACCTTATGCCTAATGTTCACTAAATTAGTTTGCTTAAACACACCTTACTGCAATTCTGCACCAGAGGCTGTCAGATAA 1770 0.4525 MAPNPRPKLRVPFFMLLLMLVSFGCSNAEWEQKPGAAIHKNVIDGSGVENSLKFEEINGRKGGGSSRVSVSTVALFTLAMAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQYYGAGNWVVIGILAGGIFIWFCKKLLEQYEEVSMLDIKGADATKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMVLASRGVSPQNAMLWSIITSLPQPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVVAEVLPDAFKEASASQVASAATLSVASMEALSTLFQNFYRDYSSQDASGFFVSLLFGLGPLLGGIILVVFALALRLPHALLMGIACGIAFVLGAWRPVQLILSSKLGFFPVVLLLAMGAAFIHVSSSGVLKVAARKKTSATDLPTLIGFPVSVQTLQSFILCGAVALHALAEGLALGVAAPKAYGFGRHIVLPVSLHGLPRGAAVASCIYGSTDSWHGSLATAAIIGFMGPIAAIGSILAGIDYSGLDHIMVLASGGIILSFGNVFNRALSLDKKKSTCGLVMGIGFATLCLMFTKLVCLNTPYCNSAPEAVR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00853 589 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Spst4g00853 589 Pfam ZIP Zinc transporter 163 289 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst4g00853 589 PANTHER ZINC/IRON TRANSPORTER 75 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00853 Spst-Chr4 36295311 36304273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00853 - - vra:106772981 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00920 1 11429801 11438272 Spst4g00853 4 36295311 36304273 PCT