Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00920 ATGGCTCCAAATCTGAGGCTAAGATTCTGTGTTCCCTTGTTATTTTTGTTGTTGAGTTTTCTCTTGAATTCAAATGCGGAATTGGATCGTAAAGTTTCACATAAGGTCATAACTGCTCCTCATAAAGATGTAGGAACTAATGTAATCGATGGCACTGGTGTAGAGAATGCTTTTAATTTTGAGAATGGAAATAGTGCGGCGGGTAGTAGGAAAGGTGCAAGTAATAAGGTATCAGTATCAACGGTTGCGTTGTTTACTCTGGCGATGGCAGCTGCCACTGGTTTAGGTGCTGTGCCCTTCTTCTTTGTGGAGCTTGATCCCCAGTGGGCTGGATTATGCAATGGAATGGCTGCAGGTGTCATGCTGGCTGCGAGCTTTGATCTAATACAGGAAGGGCAGGAGTATGGTGCTGGAAATTGGGTTGTCACTGGGATTCTAGCTGGTGGAATCTTTATTTGGCTATGTAAGAAGTTTCTTGAGCAATATGGGGAAGTCAGCATGTTGGATTTAAAAGGTGCTGATGCTGCCAAAGTTGTTCTTGTTATTGGAATAATGACCCTCCATTCTTTTGGGGAGGGATCTGGGGTTGGAGTCTCATTTGCTGGCTCAAAGGGTTTTACTCAAGGCCTATTGGTAACGTTGGCTATTGCGGTACACAACATCCCAGAAGGATTAGCTGTGAGCATGGTGCTTGCATCAAGGGGTGTTTCTCCACAGAATGCTATGTTATGGAGTATAATTACATCTTTACCCCAGCCCATTGTAGCCGTTCCTTCATTTATCTGTGCTGATGCATTCAGTAAGTTTCTTCCTTTTTGTACGGGATTTGCTGCTGGATGCATGATTTGGATGGTTATTGCAGAAGTGCTTCCTGATGCTTTCAAGGAAGCCTCAGCTTCACAGGTTGCATCAGCTGCAACCCTTTCTGTAGCATTTATGGAAGCTCTCAGCACCTTCTTTCAGAATTTCAGTCATGACTACAACTCCGAGGATGCTTCTGGCTTTTTTGTTTCATTACTTTTTGGTCTTGGACCTTTACTTGGAGGAATTATTCTGGTTGTATTTGCTCTTGCATTGCATCTTCAGCATGCTCTCCTCATGGGCACCGCATGTGGTATTGCTTTTGTTCTTGGTGCCTGGCGACCAATACAGCTTATCTTGTCTTCAAAATTGGGATTTATTCCCGTTTTGTTACTCCTGGCAATGGGGGCTGCTTTCATCCAGGTTTCTACTTCTGGTGTATTGAAGATGGCAGCTTCCAAAAAGGCCTCAGTCAATGACTTGCCTACACTCACTGGTTTCCCTCTCAGTGTTCACACCCTTCAATCATTCATATCATGCGGTGCAGTAGCCTTTCATGCCTTAGCTGAAGGACTTGCATTGGGAGTAGCTGCACCAAAAGCATATGGACTCGGTCGTCACATGGTCCTTCCAGTCTCTCTACACGGCCTACCTCGAGGTGCAGCTGTGGCCAGCTGCATATTTGGAGCCACTGATAGCTGGCATGGTTCCCTTGCAACAGCTGCCATAATTGGATTTATGGGTCCAATATCAGCAATAGGAGCTATTCTTACTGGTATTGACTACAGTGGTCTTGATCACATTATGGTTATTGCCTGTGGTGGATTAATCCCTAGCTTCGGACCTGTAGTGAAGAGAGCTCTTAGTTTGGACAAGAGAAAGAGCACCTGTGGCCTCATTATGGGTATTGGGTTTGCTACTTTATGTCTAACATTCACTAGGTTGGTTTGCTTACATACACCTTACTGCAATTCTGCACCAGAGGCTGTCAGATAA 1797 0.448 MAPNLRLRFCVPLLFLLLSFLLNSNAELDRKVSHKVITAPHKDVGTNVIDGTGVENAFNFENGNSAAGSRKGASNKVSVSTVALFTLAMAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQEYGAGNWVVTGILAGGIFIWLCKKFLEQYGEVSMLDLKGADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFTQGLLVTLAIAVHNIPEGLAVSMVLASRGVSPQNAMLWSIITSLPQPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVIAEVLPDAFKEASASQVASAATLSVAFMEALSTFFQNFSHDYNSEDASGFFVSLLFGLGPLLGGIILVVFALALHLQHALLMGTACGIAFVLGAWRPIQLILSSKLGFIPVLLLLAMGAAFIQVSTSGVLKMAASKKASVNDLPTLTGFPLSVHTLQSFISCGAVAFHALAEGLALGVAAPKAYGLGRHMVLPVSLHGLPRGAAVASCIFGATDSWHGSLATAAIIGFMGPISAIGAILTGIDYSGLDHIMVIACGGLIPSFGPVVKRALSLDKRKSTCGLIMGIGFATLCLTFTRLVCLHTPYCNSAPEAVR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00920 598 Pfam ZIP Zinc transporter 173 298 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst1g00920 598 PANTHER ZINC/IRON TRANSPORTER 84 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00920 Spst-Chr1 11429801 11438272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00920 - - gmx:100800396 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00920 1 11429801 11438272 Spst1g00920 1 11429801 11438272 ECH
Spst1g00920 1 11429801 11438272 Spst4g00853 4 36295311 36304273 PCT