Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00848 ATGGGGAATTGTTTGCATAAGGGTAATTGTAATGATGGTGATTCTGATCATCATGTGGATTTTGCTTCTGGGAATGTGCAAATTATTACTACCCTAGAATCTTGGAACCAAAATATAGAACGAGCAAAGAAGGATAGTAAAATTGTTATTGCAAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGATGATTGCTCCTTATTTCAGCGACTTGTCCCAGAAGCACTCTTCTATCATGTTCTTGTTAATTGATGTGGATGAACTAGCTGACTTCAGCACTTCCTGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGAAACGAGTTTGACAGACTTGTAGGAGCCAACAAATCAGAGCTGGAGAAGAAGATTGCTGCGCTTACTGATGTAGTTCCTCATTAG 411 0.3942 MGNCLHKGNCNDGDSDHHVDFASGNVQIITTLESWNQNIERAKKDSKIVIANFSATWCGPCKMIAPYFSDLSQKHSSIMFLLIDVDELADFSTSWDIKATPTFFFLKDGNEFDRLVGANKSELEKKIAALTDVVPH 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00848 136 Pfam Thioredoxin 29 128 IPR013766 -
Spst4g00848 136 Gene3D Glutaredoxin 1 134 - -
Spst4g00848 136 FunFam Thioredoxin 22 132 - -
Spst4g00848 136 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Spst4g00848 136 PRINTS Thioredoxin family signature 96 107 - -
Spst4g00848 136 PRINTS Thioredoxin family signature 49 57 - -
Spst4g00848 136 PRINTS Thioredoxin family signature 57 66 - -
Spst4g00848 136 PANTHER THIOREDOXIN 26 128 - -
Spst4g00848 136 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Spst4g00848 136 CDD TRX_family 37 128 - -
Spst4g00848 136 SUPERFAMILY Thioredoxin-like 21 131 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00848 Spst-Chr4 36165383 36168643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00848 K03671 - gmx:100527258 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00906 1 11324124 11326202 Spst4g00848 4 36165383 36168643 PCT