Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00906 ATGGGGAACTGTGTGGCTAAGTCTCAACAAGCTAAGGATAGTGATTCTGATCATGATGTGGAGTTTGCTGCTGGGAATGTGAAACTTATTACCACCAAAGAAGCTTGGGACCAATATTTGGAAGAAGCAAGGAGGGATGGCAAAATTGTGATTGCGAATTTCAGTGCAACATGGTGTGGTCCTTGTAAGATGATTGCGCCATATTACTGCGAGTTATCTGAGAAATACACATCCATGATGTTCTTGTTAGTTGATGTGGATGAACTAACTGACTTCAGCACTTCATGGGACATCAAAGCAACACCAACCTTCTTCTTTCTTGAAGATGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATTGTTGCCATCAATGATTCACTTCCCGAATACAAACAGTGA 423 0.4208 MGNCVAKSQQAKDSDSDHDVEFAAGNVKLITTKEAWDQYLEEARRDGKIVIANFSATWCGPCKMIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLEDGQQLDKLVGANKPELQKKIVAINDSLPEYKQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00906 140 PANTHER THIOREDOXIN 27 128 - -
Spst1g00906 140 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
Spst1g00906 140 PRINTS Thioredoxin family signature 97 108 - -
Spst1g00906 140 PRINTS Thioredoxin family signature 50 58 - -
Spst1g00906 140 PRINTS Thioredoxin family signature 58 67 - -
Spst1g00906 140 SUPERFAMILY Thioredoxin-like 23 129 IPR036249 -
Spst1g00906 140 Pfam Thioredoxin 30 128 IPR013766 -
Spst1g00906 140 ProSiteProfiles Thioredoxin domain profile. 9 133 IPR013766 -
Spst1g00906 140 Gene3D Glutaredoxin 1 138 - -
Spst1g00906 140 FunFam Thioredoxin H9 1 139 - -
Spst1g00906 140 CDD TRX_family 34 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00906 Spst-Chr1 11324124 11326202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00906 K03671 - gmx:100813401 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00906 1 11324124 11326202 Spst1g00906 1 11324124 11326202 ECH
Spst1g00906 1 11324124 11326202 Spst4g00848 4 36165383 36168643 PCT