Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00845 ATGGTGACCAGCTCTATGGAAACACACAATAGATTTGGATTACTTACCATTTCTTTGGTCCTTTTTCTGACTCTCACCAAAAGTTTAAGCTCAACTGCATTTGATGTCAGTGAATATGAAGGTGGGGAAAGCATTGATATAGCAGATTCTATCTTAAGTTATGGAAGTGAAATGGGAGACATGGAAGAAAATGAATGGCAGATGGTGCAAACGAAAGGAAACCAATTTGTGGTGAACGACCAACCTTTCTATGTTAATGGATTCAACACGTACTGGTTGATGGTATTTGCTGCGGATCAGTCCACCAGAGGAAAGGTCACTGAGGTGTTCAAACATGCGTCCTCTGTGGGTATGTCAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGCGTGCTCTTCAGAAATCTCCATCAGTTTATGATGAAGTTGTGTTCAAGGCCTTGGATTTTGTGGTGAGTGAAGCAAAGAAATACAAAATTAGGCTCATCTTATCACTGGTTAACAACTGGGAGGCTTACGGTGGCAAAGCACAGTATGTGAAGTGGGGCAATGCAGCTGGCCTTAACTTGACATCTGATGATGACTTCTTTTCACATCCAACTCTCAGAAGCTACTATAAGGGTCATGTTAAGACGGTGCTAAATAGAGTTAATACATTCACAAATATCACTTACAAGGAAGATCCTACCATTTTTGCTTGGGAACTGATGAATGAGCCTCGATGCACATCAGACTCCTCAGGTGATGTGTTACAGGATTGGATAAAAGAAATGGCATTCTATGTGAAAAGCATTGATACAAAACACCTAGTGGAGATTGGACTGGAAGGATTTTATGGCCCCTCGACACCTCAGAGATATCAGTTAAACCCAAATGCATATGCTCAACAGGTCGGAACTGATTTTATCAGGAACCACCAGGTTCTGGGTGTTGACTTCGCTTCTGTTCACATATATCCAGACTCTTGGATTTCACAATCAATTGCTGATTCCCACCTTCAATTTATAAAGTCTTGGATGGAAGCGCACATAGAGGATGCTGAAAAGTATCTTGGAATGCCAGTTGTTTTTGGTGAGTTTGGTGTGTCTGCAAAAGCTCCTGGCTACAATTCAACATACAGAGACAACCTTATAAACACTGTGTACAAGACAATCCTAAACTCTACCAAGAAAGGAGGTAGTGGGGCTGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACGGATTACATGGATGATGGGTATGCAATTGTTCTCTCAAAATCACCTTCCACATCAAGCATTATATCCCTTCAATCCACGAGGCTAGCCCTCTTCAACTCCTTGTGTTCTAAGAAATGCAGTTGGGGTTGTAAGAAAAGAAATCTGTTGGAAAAAGTACTCTATCATGACGAACTCTAA 1404 0.4181 MVTSSMETHNRFGLLTISLVLFLTLTKSLSSTAFDVSEYEGGESIDIADSILSYGSEMGDMEENEWQMVQTKGNQFVVNDQPFYVNGFNTYWLMVFAADQSTRGKVTEVFKHASSVGMSVCRTWAFNDGQWRALQKSPSVYDEVVFKALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKGHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDVLQDWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRYQLNPNAYAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSIADSHLQFIKSWMEAHIEDAEKYLGMPVVFGEFGVSAKAPGYNSTYRDNLINTVYKTILNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIVLSKSPSTSSIISLQSTRLALFNSLCSKKCSWGCKKRNLLEKVLYHDEL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00845 467 SUPERFAMILY (Trans)glycosidases 68 424 IPR017853 -
Spst4g00845 467 PANTHER - 19 456 IPR045053 GO:0004553
Spst4g00845 467 FunFam Mannan endo-1,4-beta-mannosidase 6 65 441 - -
Spst4g00845 467 Gene3D Glycosidases 66 440 - -
Spst4g00845 467 Pfam Cellulase (glycosyl hydrolase family 5) 80 382 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00845 Spst-Chr4 36122926 36125273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00845 63 467 Glycoside Hydrolase AT5G01930 74.693 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00845 K19355 - gmx:100801139 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00903 1 11306809 11307956 Spst4g00845 4 36122926 36125273 PCT