Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00903 ATGGAGAGATTTGGTGTTCGCATTATTTCTTTGGTGCTTCTCTTGATGCTTCCTAAAAATTTAAGTGCCAATGCATTTGGTGGCATTATGAAGGATGAGGAAGCACTCAAGGAAGGCCAAAATGAAATGGAAAATTCTATCCCAAATTATGGTGAAATGAGGGACGTGAAAGATGATGATTGGCAGATGGTACAAAAGAAGGGAAACCAATTTGTGGTGAATGACAAGCCTTTCTATGTCAATGGATTCAACACATATTGGCTGATGGTATTTGCTGCAGATGAGTCCACCAGAGGAAAGGTCACTGAGGTTTTCAAGCAAGCATCCTCAGTGGGTATGACAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAATGGCGGGCCCTGCAGAAATCTCCATCAGTTTATGATGAAGTCGTCTTCAAGGCCTTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATCAGGCTTATATTATCATTGACTAACAACTGGGAGGCTTATGGAGGCAAAGCACAATATGTGAAATGGGGCAATGCTGCTGGCCTCAACTTGACCTCTGATGATGACTTCTTCTCACATCCAACTCTTAGAAGCTACTACAAGGCCCATGTTAAGGCAAACTGTGCTCAATAG 639 0.4257 MERFGVRIISLVLLLMLPKNLSANAFGGIMKDEEALKEGQNEMENSIPNYGEMRDVKDDDWQMVQKKGNQFVVNDKPFYVNGFNTYWLMVFAADESTRGKVTEVFKQASSVGMTVCRTWAFNDGQWRALQKSPSVYDEVVFKALDFVVSEAKKYKIRLILSLTNNWEAYGGKAQYVKWGNAAGLNLTSDDDFFSHPTLRSYYKAHVKANCAQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00903 212 Coils Coil 203 212 - -
Spst1g00903 212 PANTHER - 11 208 IPR045053 GO:0004553
Spst1g00903 212 SUPERFAMILY (Trans)glycosidases 63 208 IPR017853 -
Spst1g00903 212 Gene3D Glycosidases 61 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00903 Spst-Chr1 11306809 11307956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00903 56 208 Glycoside Hydrolase AT5G01930 79.085 3.74e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00903 K19355 - gmx:100811794 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00903 1 11306809 11307956 Spst1g00903 1 11306809 11307956 ECH
Spst1g00903 1 11306809 11307956 Spst4g00845 4 36122926 36125273 PCT