Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00763 ATGGGTTGCACGGCATCGAAACTGGACAACGAGGAAACCGTGAGGCGCTGCAAGGAGCGGCGTCGTTTAATGAAATATGCCGTCTACGCCCGCCACCACCTCGCGGCAGCGCACTCCGACTACTGCCACTGCCTCCGCCTCACCGGCTCCGCACTCTACACCTTCGCCGCCGCCGAACCCCTCGCAGTCGCCGACGACACCCCTGCCGTTCTCCTCCACAAAACCACCAATAATCCCCAGCCACCACCACATCCTCCTCCCTCCGCTACCGCCTCAACAAGCCCTAGACTCCCTCGCATAGTGACCTCCATTGTCACGCGCCGCCGTCAACCGCCTTCGAGACTCCCTCACGTTCTCTCCGAATCGAGCCTCTGTTCCTCGCCCCGAAGCGAGCATTCGAACTGTTTCGCAACCGCTCCACAACAAGCTCAATCCACACCTACTTCGCAGCCACCAGATCCTCCTCCTCCCGGTGCCACCCGCCGCCGCAAACCGCCGCCGAAGCTCCCTCACATACTCTCCGAATCAAGCCTCTTCTCCTCGCCTCGAAGCGAATACTCGAATTTCTTCGCCACCGCGCACCAAGCTCAATCCACGCCTACTTCGCAAACCTCTTCCGTTTGGAATTGGGAGAATTTATATCCTCCTCCTTCTCCTCCAGGCTCCGATTATTTCCGCCAACGCCAAACCAACAAACCACAAACGCCGAATTTCGAATCGTCGGAATCGGAATCTGAATCGATGTATAATCCATTTCGTTCGAACTCTCAACGCAATCACAAAATTGATAACACTACAAACGTCGCTTCACATTCACAACAACAAAACGCAGAACCAGATATTTACGAATCGGAACAGAAACACTTACATGAACCGATTCAAACGGAGCGCGAGGAGGTTCGGTGCAGCGATTGGGAGGACCGTTACAGTCCCTCGAGTTCGTCGGAGCAGGAGGAAGAAGGTGCCGGATTCTCCTCACAGTCTAAGACGGAGTATGTATCCGGAGGTCATGCTTCGGCGGCGAAGGTCAGCGATGACGTGGCGGAGCCGAAGGTGGCTGTGAGGCATAGGGATTTGAAGGAGATTGTGGAAGCGGTTAGGGAGAATTTCGAGAAAGCTGCAGTGGCCGGAGATCAGTTATCGGAGATGCTCGAGGTTAGCAGAGCGCACCTTGATCGGAGTTTCAACCAGTTGAGGAAAACACTCTACCATTCAAATAGTATATTGAGCAAGCTGAGCTCGAGTTGGACCTCTAAACCGCCGTTGGTTGTTAAATACCGGCTCGACGCCGGTTCGTTGGACGGACCGGGCGGTTCGAAGAGTCTCTGCTCCACTCTGGAACGCCTTTTGGCTTGGGAAAATAAGCTGTATCACGAAGTGAAGGCAAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTGTCAGCCCTGCAGAGTCTAGAGTGCAAAGGTGGTGATGAAGCAAAGCTGGATAAGACCAAGGCTTCCATAACAAGGTTGCAGTCATTGATTGTTGTCACATCTCAAGCTGTATCCACCACCTCAGCTGCCATCAATGGCCTTAGGGACACTGATCTTGTTCCTCAGCTTGTTGACCTCTGTCATGGAATCATGTATATGTGGAAGTCAATGCATCAGTACCATGAAATCCAAAGCAACATTGTGCAGCAAGTCCGTGGCCTTGTGAATCAATCATCCAAAGGTCACACAACGTCTGAATCACACAAGCAAGCAACAAGGGATCTTGAATCAGCTGTGTCAGCATGGCACTCCAGTTTCTGCCGTCTCATAAAGTTTCAACGTGACTTTATCCTTTCTCTGCATGGCTGGCTAAAGTTGAACCTTATTCCAGTCAACAATGACAACAACAATAACACTGAATCATCTCACGTTTTTTCCTTCTGTGATGAATGGAAACTTGCCCTTGACCGTGTTCCAGACACAGTTGCTTCAGAAGCAATCAAGAGCTTCATCAACGTTGTCCATGTGATATCTGTGAAGCAATCTGAGGAGCTGAAGATTAAGAAGAGAAGTGAGAGTGCCTCCAAGGAACTTGAGAAGAAATCTTCATCTCTGAGAAGCATAGAAAGGAAGTTTTACAACTCATATTCTATGGTAGGCATTACCCCTCCTGAGTCAGGGCCTGGTAATGGACAAGGCTTGGATGCAAGAGACCCTCTTGCTGAGAAGAAAGTAGAACTGGAATCCTACCAAAGGCATGTTGAAGATGAAATGATGAAGCATTCAAAAGCTGTTGAGGTGACTAGGGCTATGACACTCAACAATCTTCAGACTGGCTTGCCTGGAGTGTTCCAGGCAATGGCCAGTTTTTCTTCATTATTCGCTGAGGCCCTTGAGTCAGTATGTAGCCGTTCACATGCCATGCAGTAG 2391 0.5056 MGCTASKLDNEETVRRCKERRRLMKYAVYARHHLAAAHSDYCHCLRLTGSALYTFAAAEPLAVADDTPAVLLHKTTNNPQPPPHPPPSATASTSPRLPRIVTSIVTRRRQPPSRLPHVLSESSLCSSPRSEHSNCFATAPQQAQSTPTSQPPDPPPPGATRRRKPPPKLPHILSESSLFSSPRSEYSNFFATAHQAQSTPTSQTSSVWNWENLYPPPSPPGSDYFRQRQTNKPQTPNFESSESESESMYNPFRSNSQRNHKIDNTTNVASHSQQQNAEPDIYESEQKHLHEPIQTEREEVRCSDWEDRYSPSSSSEQEEEGAGFSSQSKTEYVSGGHASAAKVSDDVAEPKVAVRHRDLKEIVEAVRENFEKAAVAGDQLSEMLEVSRAHLDRSFNQLRKTLYHSNSILSKLSSSWTSKPPLVVKYRLDAGSLDGPGGSKSLCSTLERLLAWENKLYHEVKAREGVKIEHEKKLSALQSLECKGGDEAKLDKTKASITRLQSLIVVTSQAVSTTSAAINGLRDTDLVPQLVDLCHGIMYMWKSMHQYHEIQSNIVQQVRGLVNQSSKGHTTSESHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWLKLNLIPVNNDNNNNTESSHVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIKKRSESASKELEKKSSSLRSIERKFYNSYSMVGITPPESGPGNGQGLDARDPLAEKKVELESYQRHVEDEMMKHSKAVEVTRAMTLNNLQTGLPGVFQAMASFSSLFAEALESVCSRSHAMQ 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00763 796 MobiDBLite consensus disorder prediction 315 334 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 116 146 - -
Spst4g00763 796 PANTHER UNCHARACTERIZED 1 792 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 284 314 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 223 260 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 193 212 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 78 92 - -
Spst4g00763 796 Coils Coil 678 698 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 72 180 - -
Spst4g00763 796 Pfam Protein of unknown function (DUF632) 359 662 IPR006867 -
Spst4g00763 796 MobiDBLite consensus disorder prediction 284 345 - -
Spst4g00763 796 MobiDBLite consensus disorder prediction 193 260 - -
Spst4g00763 796 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Spst4g00763 796 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00763 Spst-Chr4 34552371 34558512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00763 444 685 Acyl Lipid Metabolism Gene Families AT2G27090 31.474 1.58e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00763 - - gmx:100792843 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00763 4 34552371 34558512 Spst4g00763 4 34552371 34558512 ECH
Spst4g00763 4 34552371 34558512 Spst1g01258 1 15176851 15182224 PCT