Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01258 ATGGGTTGCACGGCGTCCAAGCTGGAAAACGAGGACACCGTTCGTCGCTGCAAGGATCGTCGCCGTCTCATGAAGGACGCAGTCTACGCGCGCCACCAACTTGCCGCTGCCCACTCCGACTACTGCCGCTCCCTCCGCCTCACCGGTTCCGCCCTTTCCACCTTCGCCGCTGGCGAAACATTCTCCGTCTCCGACCACACCCCCGCTGTCTTCCTCAGCAACTCCCAACAACCACCACAACCCATCCATCACACCCGCCCACCCTCACCACCTCACCACCGCCACCACCACCCCCATCACTCTCCACCACCCTTCAACCCTTCCCCGCCGCCGAAACTCGCCCCTGTCCAACCGCGCCGCCGAAAAGCACCGCCGCAGAAGCTCCCCCATATCCTCTCCGACTCAAGCCCCTCCTCCACGCCGCGAAGCCACGTGTCGAATTTTCCTTCGAACTTTTTCCCCACCGCGCATTCCACATACTCCTCCACCCCTTCCCAGACCTCCTCCGTTTGGAACTGGGAAAATCTCTACCCTCCCCCACCCCCTCCCGCTTCCGATTACTTCCCCGAAGAACAACACCAATACCAACAAAAACTCTCACAGATGCAGACACAATCACAATCACCTTCCCTTCACTCTCACAAAACACAAACACCCTCTCATTACTCCCACAAAACCCAACCCACCAATCCCCAAATTCACGACACCGACTCCGAGAGATCTGAATACGATTACTTCGGCGGAAAACTTGAAACTCAAAAAACTTACTGTCACACTCGCTCTGATTCTAACTCTCATCACCATCTTCCCGAGGAGTATACTGAAACTGAGAGGGAGGAGGTTCAGTGCAGTGAGTGGGGGGATCATTACAGCACCACGAGTTCCTCCGATGATGATGACGATGATGAGGTGGAAGAGTATGTGGAATCGCGGTCCGAAATCGGGACGCGGTCGAATTTCGGGTCATCCATGCGGGCTGAGTCGGTTGCGGCTGGAGGCGGCGCGAAAGGGTTCGATGCCGCGTCCTCCGTCGCGGAGATGAAGATGGTGGTGAGGCATAGGGACTTGAGGGAGATCGTGGATGCTATTAAGGAGAATTTTGATAATGCTGCTTCCGCTGGAGATCAGGTTTCGGAGATGCTCGAGATCAGCAAGGCTCAGCTTGATCGTAGCTTCAAACAATTGAGGAAGACTGTGTATCACTCGAGTAGCATATTGAGCAACTTGAGCTCGAGTTGGACCTCGAAACCGCCGCTGGCGGTTAAGTACCGGCTCGACGCTGGTTCGCTGGATGAACCGGGCGGTTCCAAGAGTCTTTGCTCCACTCTAGAACGGCTTTTGGCGTGGGAGAAAAAGCTCTACGAGGAGGTTAAGGCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCTCTGCAAACTCAAGAATACAAAGGAGAGGATGAAGCTAAGATATTCAAAACAAAGACTTCCATAAATAGGCTGCAGTCACTAATAGCTGTTACATCTCAGGCTGTGTCTACCACCTCAACTGCCATTATTGGCCTTAGGGACTCTGATCTTGTCCCTCAGCTTGTTGCTCTCATCCATGGATTTATGTATATGTGGAAAGCAATGCACAATTACCATGAAATTCAGAGCAACATAGTACAGCAAGTCCGTGGCCTTGTGAACAGATCTTCAAGAGGTGACTCCACTTCTGAACTACACAGGCAGGCAACTCGGGACCTTGAAGCGGCCGTGTCAGCTTGGCACTCCAGTTTTTGTCGCCTTATAAAATTTCAGCGCGATTTCATCCTCTCCTTGCATGGCTGGTTCAAGCTCAGCCTTCTTCCAGTCAACAATGATAACATCAACAACAGGGACAACTCTGATACATATCACTTTTTTGATGAATGGAAACTCGCACTTGACCGTGTTCCAGACACGGTTGCATCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAATCTGAAGAGCTCAAGATCAAGAAAAGAACAGAGACTGCATCCAAGGAACTTGAGAAAAAGGCTTCCTCTGTGAGAAACCTAGAGAGGAAGTTCTACAGTTCATACTCGATGGTAGGCATTAGCCTTCCTGATACAGCACCTGACAATGGACAAGGTCTGGATGCTCGCGATCCACTCGCTGAGAAAAAACTGGAACTGGCAACTTGCCAAAGGCGCGTTGAAGATGAAATGCTGAGGCATTCAAAAGCCGTGGAGGTAACAAGAGCCATGACCCTGAACAATTTGCAAACAGGTTTACCTGGAGTTTTTCAGGCATTGACCAGTTTCTCTTCCTTGTTCACTGATGCTCTTGATTCAGTGTGTACCCGTTCATATGCCATCAAGTAG 2382 0.5105 MGCTASKLENEDTVRRCKDRRRLMKDAVYARHQLAAAHSDYCRSLRLTGSALSTFAAGETFSVSDHTPAVFLSNSQQPPQPIHHTRPPSPPHHRHHHPHHSPPPFNPSPPPKLAPVQPRRRKAPPQKLPHILSDSSPSSTPRSHVSNFPSNFFPTAHSTYSSTPSQTSSVWNWENLYPPPPPPASDYFPEEQHQYQQKLSQMQTQSQSPSLHSHKTQTPSHYSHKTQPTNPQIHDTDSERSEYDYFGGKLETQKTYCHTRSDSNSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDDEVEEYVESRSEIGTRSNFGSSMRAESVAAGGGAKGFDAASSVAEMKMVVRHRDLREIVDAIKENFDNAASAGDQVSEMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDAGSLDEPGGSKSLCSTLERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIAVTSQAVSTTSTAIIGLRDSDLVPQLVALIHGFMYMWKAMHNYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQATRDLEAAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLLPVNNDNINNRDNSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQSEELKIKKRTETASKELEKKASSVRNLERKFYSSYSMVGISLPDTAPDNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTDALDSVCTRSYAIK 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01258 793 MobiDBLite consensus disorder prediction 131 174 - -
Spst1g01258 793 PANTHER UNCHARACTERIZED 1 787 - -
Spst1g01258 793 MobiDBLite consensus disorder prediction 260 285 - -
Spst1g01258 793 MobiDBLite consensus disorder prediction 256 323 - -
Spst1g01258 793 MobiDBLite consensus disorder prediction 87 101 - -
Spst1g01258 793 Pfam Protein of unknown function (DUF632) 356 659 IPR006867 -
Spst1g01258 793 MobiDBLite consensus disorder prediction 190 234 - -
Spst1g01258 793 MobiDBLite consensus disorder prediction 102 118 - -
Spst1g01258 793 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Spst1g01258 793 Coils Coil 675 695 - -
Spst1g01258 793 MobiDBLite consensus disorder prediction 70 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01258 Spst-Chr1 15176851 15182224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01258 1 96 Acyl Lipid Metabolism Gene Families AT2G27090 31.731 2.72e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01258 - - gmx:100815888 1234.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01258 1 15176851 15182224 Spst1g01258 1 15176851 15182224 ECH
Spst4g00763 4 34552371 34558512 Spst1g01258 1 15176851 15182224 PCT