Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00754 ATGGCTACTGCCAATCCCTTTGATTTGTTGGGTGACGACGTTGAAGATCCGTCGCAATTGCTCGCGGCTGAGCATTTGAAGGCAGCCGTGACTCCTAAGAAGGAACAGGGCAAACCTGGAACCCGCAGTGGCGCGGCGACATCTCAACCGGCCAAGCCGGCTCAATTGCCTTCCAAACCGCTTCCTCCTTCTCAGGCTGGTGGCCGAGGAGGTGGTCGAGGATATGGACGAGGACGTGGTGGTGGTAGTGGCTTTGGGCGTGATTTTCCCAGTGATGAAAACTCATCTGCCCCTGCTAACCAAGGATCCTTTGAAGATGCTGGGAATCCCTCTGAAAGACGAGGTTATGGTGCTCCACGTGGGCCCTATCGTGGCATTGGTCGTGGTCGACGTGGAGGTTTTAGCAATGGTGATGTTGGTGAAGATGGACGCCCAAGAAGAGCTTTTGAACGGCGCAGTGGGACTGGACGAGGAAGTGAATTCAAACGAGATGGTGCTGGACGAGGAAACTGGGGTACACAATCCGATGAAATTGCTCAGGTGACTGAGGAAGTGGCAAACCAAACTGAAAAGAATTTGGGTTTGGGTGATGAGAAGCCAGCAGGTGAGGAAGATGCTGCAGATGGTAACAAGGAGAGTCCTGCTAATGAAAATGAAGAGAAGGAACCTGAGGACAAAGAGATGACTCTCGAAGAGTACGAGAAAGTGTTGGAAGAGAGAAGGAAGGCTCTGCAGGGAATCAAAACTGAAACCCGGAAGGTGGATGTCAAAGAGTTTGCATCCATGCAGCCACTTTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCTGACAAGGATAAACGTAAAGATGCTTTGGAGAAAGAGGAGAGATCCAAGAAGTCTGTGAACATCACTGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACTAGTGGACGGGGTCGGGGACGTGGTCGTGGTTCCCGAGGAGGATACAGTGGAAATGCAGGCAACAATGTTGCAGCTCCGTCAATTGAGGATCCTGGGCAATTTCCATCCTTGGGTGGCAAGTGA 1071 0.5061 MATANPFDLLGDDVEDPSQLLAAEHLKAAVTPKKEQGKPGTRSGAATSQPAKPAQLPSKPLPPSQAGGRGGGRGYGRGRGGGSGFGRDFPSDENSSAPANQGSFEDAGNPSERRGYGAPRGPYRGIGRGRRGGFSNGDVGEDGRPRRAFERRSGTGRGSEFKRDGAGRGNWGTQSDEIAQVTEEVANQTEKNLGLGDEKPAGEEDAADGNKESPANENEEKEPEDKEMTLEEYEKVLEERRKALQGIKTETRKVDVKEFASMQPLSNKKDNDEIFIKLGSDKDKRKDALEKEERSKKSVNITEFLKPAEGERYYNTSGRGRGRGRGSRGGYSGNAGNNVAAPSIEDPGQFPSLGGK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00754 356 MobiDBLite consensus disorder prediction 246 356 - -
Spst4g00754 356 Gene3D - 143 258 - -
Spst4g00754 356 MobiDBLite consensus disorder prediction 135 164 - -
Spst4g00754 356 Coils Coil 230 250 - -
Spst4g00754 356 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 355 IPR039764 GO:0003723
Spst4g00754 356 MobiDBLite consensus disorder prediction 196 234 - -
Spst4g00754 356 MobiDBLite consensus disorder prediction 26 234 - -
Spst4g00754 356 MobiDBLite consensus disorder prediction 89 107 - -
Spst4g00754 356 MobiDBLite consensus disorder prediction 173 189 - -
Spst4g00754 356 Pfam Hyaluronan / mRNA binding family 145 254 IPR006861 -
Spst4g00754 356 MobiDBLite consensus disorder prediction 270 300 - -
Spst4g00754 356 Pfam Stm1 1 80 IPR019084 -
Spst4g00754 356 SMART HABP4_PAI_RBP1_2 145 255 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00754 Spst-Chr4 34108691 34112252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00754 K13199 - gmx:100791259 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00754 4 34108691 34112252 Spst4g00754 4 34108691 34112252 ECH
Spst4g00754 4 34108691 34112252 Spst1g01246 1 14746353 14749326 PCT