Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00733 ATGGAGAAGGTAAGCGTGAGCCACATGAACGGTCGTTTCGCATTTCCCAATCGCGGTTTCAATTTTCTTCAATTTAAGCGCTCAATTTTCTTCCTCAAGTTCCCTAGTCCGAACCTGAATCCGAACCTCCTTCGACCGCGAAAGCCCAATTGCTCAGTACCAGACGGCACCGTTCCGTCTTCTGCTGGTGCCACGGACTTGACTCTTGCGGTGAAGAAGAAAGCAGCAGAGGTGTCTTCTGACCTCAAAGGGACCTCCATATTTCTGGTTGGTATGAAAAGCTCTCTCAAAACCAGTTTGGGGAAGCTGCTGGCTGATGCATTGCGGTATTATTATTTTGACAGTGACAGTTTGGTGGAAGAAGCTGTAGGTGGTGCACTTGCTGCAAAATCTTTGAGAGAGACTGACGAGAAAGGCTTCTATGAGTCTGAGACTGAAGTACTGAAGCAATTATCTTCCATGGGTCGACTAGTGGTTTGTGCAGGAAATGGGGCTGTGACAACTCCAACTAATCTGGCACTTCTGAGACATGGAGTTTCATTGTGGATAGATGTACCTCTAGATTTTGTGGCTACGGATATAACAGAAGACCAGAGTCAATTTCCTCCATCTGAAATATCTATTTCAGGATTATACCCAGAGGTAAAGGATGAACTAGGTGCTCTGTATGATAAATACAGAGCTGGATATGCTACAGCTGATGCTGTTATTTCAGTTCGAAAAGTTGCATCCTGGTTGGCCTGTGACAACTTAGATGAAGTTACAAGAGAAGACTTGACTTTGGAGGCTCTTAAGGAAATTCAGAAGTTGACCAGAGTAAAGAAGATGATCGAAGAGGCTGCAAGACCATTTTAA 855 0.4468 MEKVSVSHMNGRFAFPNRGFNFLQFKRSIFFLKFPSPNLNPNLLRPRKPNCSVPDGTVPSSAGATDLTLAVKKKAAEVSSDLKGTSIFLVGMKSSLKTSLGKLLADALRYYYFDSDSLVEEAVGGALAAKSLRETDEKGFYESETEVLKQLSSMGRLVVCAGNGAVTTPTNLALLRHGVSLWIDVPLDFVATDITEDQSQFPPSEISISGLYPEVKDELGALYDKYRAGYATADAVISVRKVASWLACDNLDEVTREDLTLEALKEIQKLTRVKKMIEEAARPF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00733 284 Hamap Shikimate kinase [aroK]. 84 268 IPR000623 -
Spst4g00733 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 194 IPR027417 -
Spst4g00733 284 PRINTS Shikimate kinase family signature 111 124 - -
Spst4g00733 284 PRINTS Shikimate kinase family signature 140 148 - -
Spst4g00733 284 PRINTS Shikimate kinase family signature 158 167 - -
Spst4g00733 284 PRINTS Shikimate kinase family signature 178 195 - -
Spst4g00733 284 PRINTS Shikimate kinase family signature 87 102 - -
Spst4g00733 284 Pfam Shikimate kinase 97 199 IPR031322 -
Spst4g00733 284 PANTHER SHIKIMATE KINASE 62 270 - -
Spst4g00733 284 Gene3D - 69 282 IPR027417 -
Spst4g00733 284 FunFam Shikimate kinase 2, chloroplastic 69 279 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00733 - - gmx:100526928 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03634 1 45899241 45906377 Spst4g00733 4 30980526 30989904 PCT