Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03634 ATGATTGTGAAGGATGAAAATTGTGGCGTTGGTTTGGGGGGAGAAAGAAGATGGTTTGGGGGTTTTGGAAGCTTGATTAGGAGGAAGCAAGTTGATTCTGTTCACTCCAGGGGTCATGGTCAATTGGCTAGGAAGTTATCTGCTGTTGATCTCGTTGGAATTGGGGTTGGAGCTACCATAGGAGCTGGAGTGTATATTCTCATTGGAACAGTTGCCAGAGAGCAAGCAGGGCCAGCACTAGTGATATCACTTCTCATTGCTGGAATAGCTGCTGGACTGTCAGCTTTTTGCTATGCAGAACTTGCATGTCGGTGCCCATCTGCAGGGAGTGCCTATCATTATACATACATATGCATCGGAGAAGGGGTGGCTTGGTTGGTCGGTTGGTCTCTGATTCTAGAATATACAATTGGTGCTTCTGCTGTCGCTCGTGGCATAACACCAAATCTGGCCTTGTTTTTTGGTGGAGAGGAAAACCTACCTTTATTTTTGGCTCGACACAAGTTACCAGGTCTTGGAATTGTGGTTGATCCATGTGCAGCTGCATTGATTCTTCTTGTTACCCTACTCCTGTGCCTTGGAATCAAGGAGAGTTCAACGGCACAATCTATTGTTACGACAGTAAATGTTGGTGTCATGCTTTTCATCATTTTAGCTGGTGGATATCTAGGTTTCAAGTCTGGATGGGTCGGATATGAACTCTCCAGCGGGTATTTTCCTTATGGAGTTAATGGGATGTTTGCTGGGTCTGCGATAGTGTTCTTTTCATACATTGGTTTTGATTCAGTGAGCAGCACAGCTGAGGAGGTGAAAAATCCGCAGCGAGACCTGCCTATTGGCATATCAACTGCATTAACTATATGTTGTGTTCTCTATATGCTTGTAGCTGCAGTTATTGTTGGTTTAGTACCATATTATGAGTTGAACCCTGATACCCCAATTTCTTCAGCATTTTCTAGTTATGGGATGGAATGGGCAGTGTATATTATAACAACTGGAGCTGTGACTGCCCTTTTTTCCAGTTTGCTGGGTTCTGTTCTTCCTCAGCCACGTGTCTTTATGGCAATGGCTAGGGATGGCTTATTGCCTCCTTTCTTCTCAGACATCCATAAAGGCACACAGGTTCCTTTGAAAAGTACCATTGTCACTGGTGTCTTTGCAGCTACTCTTGCATTCTTTTTGGATGTTTCCCAATTAGCAGGGATGGTTAGTGTGGGAACATTACTTGCATTTACCACAGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCACCTGATGAGGTACCCATTCCGTCTTCAGTTCTAACATCTGTTTATCGATCATTGGGGCACTCTGGAGGTCATATAAAGGAGGATAGGGCCACAAGCCCTGTAGATTCTTCTAGTTACTGTGAGGATAACCATCTACATAACAAGTCAGAGGCTCTACTTCGGCATCCTTTAATCATAAGAGAAGTTACCAAAGATGAACAGAATGAGAAATCTAGGCGAAAACTTGCTGCATGGACCATAGCCCTTCTATGTATGGGGATTCTAATAGTTACCAGCGCTGCTTCAGCTGACTGGTGTCCCAGGTGTTTGCGGTTAACGTTTTGTGGAATAGGTGGTGTTCTTCTTTTGTGCAGTTTAATTGTATTGGCCAGCATAAAGCAAGATGATACAAGGCACACCTTTGGACACTCAGGAGGTTTTGCTTGCCCATTTGTTCCATTCTTGCCTACTGCATGTATTCTTATAAACACCTACTTACTGATTGACCTTGGAGTTGCTACATGGCTACGAGTTTCAATATGGATGTTAATAGGAGTACTCATATACTTAATCTATGGCCGCACTCATAGCTCACTGTTACATGCAATCTATGTTCCCTCAGCATATGCTGATGAAATCCATCGGTCTAATGCAATTCATATTGCCTAG 1923 0.4347 MIVKDENCGVGLGGERRWFGGFGSLIRRKQVDSVHSRGHGQLARKLSAVDLVGIGVGATIGAGVYILIGTVAREQAGPALVISLLIAGIAAGLSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEENLPLFLARHKLPGLGIVVDPCAAALILLVTLLLCLGIKESSTAQSIVTTVNVGVMLFIILAGGYLGFKSGWVGYELSSGYFPYGVNGMFAGSAIVFFSYIGFDSVSSTAEEVKNPQRDLPIGISTALTICCVLYMLVAAVIVGLVPYYELNPDTPISSAFSSYGMEWAVYIITTGAVTALFSSLLGSVLPQPRVFMAMARDGLLPPFFSDIHKGTQVPLKSTIVTGVFAATLAFFLDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEVPIPSSVLTSVYRSLGHSGGHIKEDRATSPVDSSSYCEDNHLHNKSEALLRHPLIIREVTKDEQNEKSRRKLAAWTIALLCMGILIVTSAASADWCPRCLRLTFCGIGGVLLLCSLIVLASIKQDDTRHTFGHSGGFACPFVPFLPTACILINTYLLIDLGVATWLRVSIWMLIGVLIYLIYGRTHSSLLHAIYVPSAYADEIHRSNAIHIA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03634 640 PIRSF AA_transporter 24 434 - -
Spst1g03634 640 PIRSF AA_transporter 490 623 - -
Spst1g03634 640 FunFam probable cationic amino acid transporter 42 435 - -
Spst1g03634 640 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 26 616 - -
Spst1g03634 640 Pfam C-terminus of AA_permease 565 615 IPR029485 -
Spst1g03634 640 Pfam Amino acid permease 46 428 IPR002293 GO:0016020|GO:0022857|GO:0055085
Spst1g03634 640 Gene3D Amino acid/polyamine transporter I 42 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03634 Spst-Chr1 45899241 45906377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03634 22 625 Organic Solute Cotransporters AT3G03720 65.074 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03634 K13863 - gmx:100810218 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03634 1 45899241 45906377 Spst1g03634 1 45899241 45906377 ECH
Spst1g03634 1 45899241 45906377 Spst4g00733 4 30980526 30989904 PCT