Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00530 ATGGCTCTTAAAGGCTTGTTGGGTTCCGTTGGTTTGACCCTTTGTTTCTTTGTCTTAGAATTGGAGCCACATCAAGCACAGACATTGAGCCTTGGCCTTTCTGTTAGAGAAAACATTTCATCAAATTCTCCCATTCAAGGCTTATGCGCCTCTTCAGTCATCCTTCATGGTTACAAATGTCAAGAACTTGAAGTTACAACAACAGATGGGTACATTCTCAGCCTTCAAAGGATCCCTCAAGGTCGAACTCAGGTTTGTGACATTGAGACTGTGAAACAGCCGGTGATAATACAACACGGAGTATTGGTGGATGGAATGACATGGCTTCTGAACCCTCCAGAACAAAACCTGCCCTTGATTCTAGCTGATAATGGCTTTGACGTGTGGATTGCTAATGCCAGAGGAACAAGATATAGCCGCAAGCACACCTCTCTGGACCCCTCTAAACCAGCTTACTGGAATTGGTGCTGGGATGATATGGTGACTTATGATTTGCCTGCTATTTTTGATTATGTGTCCAACCAAACTGGACAGAAGATAAATTACGTGGGACATTCTTTGGGAACTTTGATAGTTTTGGCGTCCTTCTCCGAAGGAAAATTAGTGAATCAGCTAAAATCAGCAGCCTTGTTAAGTCCCGTAGCGTATTTAAATCACATGAAGACAGAAATTGGAATTATTGCTGCCAACTCATTTATTGGAGAGATCATAACCGCGAGTGGTGAGCCAGAATTTGATCCCAAAGGGTTACCTGTTCATCGATTTATGGAGGCTCTCTGCCGTGACCCTGGGGTAGATTGTTCAGACTTGTTTACTGCAATAACTGGTTTAAGTGATAACTGCTGCCTCAATTCTTCAACTGTTAATCTATTCATGATGCATGAACCTCAGCCAACATCTACAAAGAACGTCGTGCACTTGTCTCAGACTGTTAGAGATGGGGTTCTGGCGAAATTCGACAATGGAAAAATTACTCCTCAAATCTATAACCTTTCAAATATCCCCCATAACCTCCCTCTTTTCATAAGCTATGGAGGTGAAGATGCCCTATCTGATGTTCTTGATGTCAGGAAACTGCTTGATGATCTCAAGTTCCATGATGCAGACAAGCTAAGTGTTCAGTTCATCAACAACTACGCTCATGCAGACTATGTTATGGCATTCAATGCCAAGGACATAGTGTACAATCATGTTACTGCATTTTTCAAAAGACAATTTTAA 1221 0.4201 MALKGLLGSVGLTLCFFVLELEPHQAQTLSLGLSVRENISSNSPIQGLCASSVILHGYKCQELEVTTTDGYILSLQRIPQGRTQVCDIETVKQPVIIQHGVLVDGMTWLLNPPEQNLPLILADNGFDVWIANARGTRYSRKHTSLDPSKPAYWNWCWDDMVTYDLPAIFDYVSNQTGQKINYVGHSLGTLIVLASFSEGKLVNQLKSAALLSPVAYLNHMKTEIGIIAANSFIGEIITASGEPEFDPKGLPVHRFMEALCRDPGVDCSDLFTAITGLSDNCCLNSSTVNLFMMHEPQPTSTKNVVHLSQTVRDGVLAKFDNGKITPQIYNLSNIPHNLPLFISYGGEDALSDVLDVRKLLDDLKFHDADKLSVQFINNYAHADYVMAFNAKDIVYNHVTAFFKRQF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00530 406 SUPERFAMILY alpha/beta-Hydrolases 56 403 IPR029058 -
Spst4g00530 406 PIRSF Steryl_ester_lip 8 406 IPR025483 GO:0016788
Spst4g00530 406 PANTHER LYSOSOMAL ACID LIPASE-RELATED 50 404 - -
Spst4g00530 406 FunFam Lipase 41 404 - -
Spst4g00530 406 Gene3D alpha/beta hydrolase 48 405 IPR029058 -
Spst4g00530 406 Pfam Partial alpha/beta-hydrolase lipase region 54 111 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00530 Spst-Chr4 8337976 8348654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00530 36 405 Acyl Lipid Metabolism Gene Families AT2G15230 34.301 3.17e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00530 K01052 - gmx:100790742 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00360 1 4785297 4789226 Spst4g00530 4 8337976 8348654 PCT