Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00360 ATGTTTCTTCAAGGTTCAGTGAATTTTGCTGCTTTGACCCTTTTCTTGCTCCTACCAACGGTGCCTCATCAAGCACACGCATCAAGACGTGGCTCCTTAGGCAGAAACATCAACCCTCCAGTGTATGGTATATGTACCTCTTCTGTCATTGTGCATGGATACAAGTGTCAAGAACACGAGGTTACAACCGATGATGGATATATTCTGAGTTTGCAAAGAATCCCAGAAGGTCGAGGTAAGGGTAATGACAGCAGAAGTAGGAAACAACCAGTGATCATACAACACGGAGTTCTAGTGGATGGTATGACATGGCTTCTGAACCCTCCAGAGCAAGACCTACCTTTGATTTTAGCTGATAATGGCTTTGATGTGTGGATTGCAAACACCAGAGGAACCAGATTTAGCCGCCGACACATCTCATTGGACCCCTCTAGCCCGGCCTTTTGGAATTGGTCTTGGGATGAACTTGTCTCCTATGATCTACCTGCCATATTTAATTATGTATTCAGCCAAACGGGGCTGAAGATCAATTACGTTGGTCATTCCTTGGGAACTTTGATAGCTTTGGCATCCTTCTCCGAAGGGAAATTGGTTAATCAGCTGAAATCAGCAGTCTTGTTGAGTCCTATAGCCTATTTAAGCCACATGAACACAGCACTTGGTGTTATTGCAGCTAAGTCCTTTGTTGGTGAGGTCACTACCCTCTTCGGTCTGGCAGAATTTAATCCAAAAGGGTTACCTGTTGATGTCTTTCTCAAGTCTCTCTGCGCTTACCCTGGGATAGACTGCTATGATTTGTTGACTGCACTAACTGGTAAAAATTGTTGCCTCAATTCTTCAACTGTTGATCTATTCTTGATGAATGAACCTCAGTCAACATCAACAAAGAATATGGTGCACTTGGCTCAGACTGTTAGACATGGGGTGTTGACAAAATTTAATTATGTGAGACCAGACTATAATATTATGCATTATGGAGAAATATTCCCTCCAATCTACAATCTTTCAAATATCCCCCATGACCTCCCTCTCTTCATTAGCTATGGGGGAAGAGATGCACTTTCAGATGTTCGTGATGTTGAGAATTTACTTGATAACCTCAAGTTCCATAATGAGGACAAGCGCAGTGTCCAATTCATCAAGGAATATGCTCATGCTGACTACATAATGGGGTTCAATGCCAAGGATTTAGTATACAATGCTATTGTTTCATTTTTCAATCATCAAGTCAATATTTGA 1239 0.4197 MFLQGSVNFAALTLFLLLPTVPHQAHASRRGSLGRNINPPVYGICTSSVIVHGYKCQEHEVTTDDGYILSLQRIPEGRGKGNDSRSRKQPVIIQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRFSRRHISLDPSSPAFWNWSWDELVSYDLPAIFNYVFSQTGLKINYVGHSLGTLIALASFSEGKLVNQLKSAVLLSPIAYLSHMNTALGVIAAKSFVGEVTTLFGLAEFNPKGLPVDVFLKSLCAYPGIDCYDLLTALTGKNCCLNSSTVDLFLMNEPQSTSTKNMVHLAQTVRHGVLTKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDVRDVENLLDNLKFHNEDKRSVQFIKEYAHADYIMGFNAKDLVYNAIVSFFNHQVNI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00360 412 Pfam Partial alpha/beta-hydrolase lipase region 51 107 IPR006693 GO:0006629
Spst1g00360 412 Gene3D alpha/beta hydrolase 35 408 IPR029058 -
Spst1g00360 412 PIRSF Steryl_ester_lip 6 411 IPR025483 GO:0016788
Spst1g00360 412 PANTHER LYSOSOMAL ACID LIPASE-RELATED 49 408 - -
Spst1g00360 412 FunFam Lipase 37 408 - -
Spst1g00360 412 SUPERFAMILY alpha/beta-Hydrolases 52 407 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00360 Spst-Chr1 4785297 4789226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g00360 40 411 Acyl Lipid Metabolism Gene Families AT2G15230 37.097 3.93e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00360 K01052 - gmx:100779460 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00360 1 4785297 4789226 Spst4g00530 4 8337976 8348654 PCT