Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00520 ATGGTTCTAGGCATGAGAGCGAAGAACAGGAGAGGTGTCACGGTTCAAATTGATTTCCTCATTCACGTTCAGGAGATTAAGCCCTGGCCCCCGTCACAATCACTAAGATCCCTGCGATCCGTGTTGATAGAATGGAAGAATGGTGAATGTGCATCAGGTTCTACCACTGTTGTTTCCCCTTCACTTGGTTCAGTTATAGGTGAAGGAAGAATCGAATTTAATGAGTCATTTAGGCTACATGTAACTTTGTTGAGGGATATGTCTGTAAGAAGCGGTGATACTGATGTGTTCCAAAAGAATTGCTTGGAGTTCAAATTGTATGAGCCACGAAAAGATAGGACTGTTAAGGGTCAGTTGTTGGGGACTGCAATCATAGACTTGGCAGAATATGGGACACTTCAAGAGTCCTTGAGCACTAGTGTTCCAATGAACTGCAAAAGGAGTTACAGGAACACAGAACAGCCATTTCTGTTCCTTAAAATTCAGCCTGTTGAGAGGACTCGTGCTAGTGCCTCAATGAAGGACAATAATGTTGGTGACTCAGTGTCAACACTCATGAATGACGAATATGCTGAGGAAGCTGAGATTGCATCTTTTACTGATGATGATGTCTCCTCACATTCATCTGCAGCTGCAGCTTCTACTTCCCATGAATCCAGTGGGTTTACCCCACTAACATTAGGAAAGTATGAACCAATTAGCAGCACTGGTGTGAATGCCATGGAACATCCCTTGGCCTCGGAAGCAAGGCTTGAAAAAATTAATATGGTGCAACAAGACACACACAACAAGCTTGAGAGGAGTTCTTATATGTCATCATTGGATGTATCTTCTGTTACGAGGAATATAGTAAATGGTCATGCTTCTAACTCTCCTATTCGCAATTCATTGTCAATTCAAAAGTTTTCCACTTCACCTAGTGCCAGTTCTTCTTCACCATCTTTAGCTTTTGACAATTTAGACATAAATCCTGGGAGCAACACAAGAAGCAGTGGCCATGAAACTTTGGATCAGAGTTTTCAAGAAAAGCTTGCTAACTACAGGAATATAGTTGCAGATGTCCATAGAAATACCTACGGAAGTACATTTGGCATTTATTCAAAACACACATCATCTTATGATTGCAAATCGAATCGGATATGTATAGAAGCTGACAAATATTTTATGAAGGAGAGTGGAGGTGACAAAACTCGCCATGGTTCTGTTGAGGACTTAAGTGGAAATGAAAAACATAATTTGGACAGACAAAACTGCATAGAAGATGAAAAATTAGAAGCACAAGATGCCAAAGATGAAACCTTAATGGATAGCAACACACATTCTTTTGGAGGGTCAAATATTGGTGTGCAGGAAAAGAATTTCAAAAATGAAAGACTAAAGAACTTGAAGTCTGTGAGGTTACCAGCAGACTCAACCCGGAATACTGGATCGCTTGTTAGCAATCATCATGCTGAATTAAATGAAAATGGCATTATTAGAGATGCACAAAACAATGGAGGGAACAGAAGCAATGACAGAAGAGATGTTAAGATTCATATAAAGGAAGCAAGAAATGGTACTTTAGAAGGAAAAGTTGAGCAGTTGGAGAAGAAGATAAAGATGCTTGAAGGAGAGTTGAGAGAAGCTGCTGCAATTGAGTCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAACTCCACCAGTAAAGTTCATGCCCCAGCGCGGCGCCTTTCCAGGCTCTATCTTCATGCTTGTAAAGAAAATATTCAAGGAAGAAGGGCTGGGGCAGCTAAAAGTTCTGTTTCAGGATTAGTACTTGTTACAAAGGCATGTGGAAATGATGTCCCAAGGTTGACCTTTTGGCTGTCCAACACTATAGTGTTGAGGACAATTATAAGCCGAACCATCAAAGATTCATCAAATTCTGCTGGATCTGGTAGGAGAAGGAAAACTGAGGAGGAGGGAAATGGCAAGATAACAAGCTCACTAAGGGTGAAGGGATTATACCCCAGAAAAAATGAAAACACAGCATTAGAATATGAAGGTTTTGGTAATTGGGATGATCCGCAGACTTTGATTCCACATATGCAACACACAAAGTTGACCAACAAAGAAGTGGTTTCAGCCTCAAGAAAAAACTACAGAAGGACTTCTAGCTCATGTGACCAAGAGCAGGGTAACTTGTCACTATATATTTGGAAAAATGCTTTTAGGGAAGCCTGTGAAAGGATCTGTCCTATTCGAGCTGGAGGACATCAGTGTGGCTGTTTGCCTATGCTTTCTAGATTGGCTTTGGAATTTGTGATTATAATGGAGCAATGTGTTGCGAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGCGAATCTGCTGATGAAATTCCAACTGATCCTGTATCTGATGCTATTAGTGATCCTAAGGTTCTCCCTATTCCACCTGGGAAAACAAGCTTTGGAGCCGGTGCACAGCTAAAAACTGTGATTGGGACCTGGTCAAGGTGGTTGACTGATCTATTTGGCATGGATGATGATGACTCAATTGAAGATAAAGCTGAAACTGATAACAAGGAAGAAAGACAAAATGCATCCTTAAAGTCCTTCAGTCTTCTCAATGCTCTAAGTGACCTCCTGATGCTCCCTAAGGATATGCTGTTGAGTGCATCCATCAGGAATGAGGTATGCCCTATGTTCAATGCAACACTTATCAAGAAGATTCTACACAAGTTTGTCCCAGATGAGCTTTGCCCCGACCCTGTTCCCTCTAATGTCTTTGAGGCTCTGGACTCAGAGAATGACATGGAAGATGGAAACGAGTGTGTCAACAACTTTCCATGCATTGCAGCTACCGTTGCCTATTCACCTCCATTGGCTACTTCCATTGCAAGCATTGTTGGGGAGATGGGAAGCAAATCTCATCTAAGAAGAAACAGTTCATCTATTGTAAGGAAGTCACACACCAGTGATGATGAGCTGGATGAACTGAAGTTCCCATTATCTTCAATATTCTTCAGTGTTTCTTCATCCCCAAAAATTTCCACCAAATCCAGCTTCAAGTTGAAAGAAATTCGCAACCAATCTCCTATCAGATATGAACTCCTCAGGGATGTGTGGATTAACAGTGACTAA 3105 0.4122 MVLGMRAKNRRGVTVQIDFLIHVQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTTVVSPSLGSVIGEGRIEFNESFRLHVTLLRDMSVRSGDTDVFQKNCLEFKLYEPRKDRTVKGQLLGTAIIDLAEYGTLQESLSTSVPMNCKRSYRNTEQPFLFLKIQPVERTRASASMKDNNVGDSVSTLMNDEYAEEAEIASFTDDDVSSHSSAAAASTSHESSGFTPLTLGKYEPISSTGVNAMEHPLASEARLEKINMVQQDTHNKLERSSYMSSLDVSSVTRNIVNGHASNSPIRNSLSIQKFSTSPSASSSSPSLAFDNLDINPGSNTRSSGHETLDQSFQEKLANYRNIVADVHRNTYGSTFGIYSKHTSSYDCKSNRICIEADKYFMKESGGDKTRHGSVEDLSGNEKHNLDRQNCIEDEKLEAQDAKDETLMDSNTHSFGGSNIGVQEKNFKNERLKNLKSVRLPADSTRNTGSLVSNHHAELNENGIIRDAQNNGGNRSNDRRDVKIHIKEARNGTLEGKVEQLEKKIKMLEGELREAAAIESALYSVVAEHGNSTSKVHAPARRLSRLYLHACKENIQGRRAGAAKSSVSGLVLVTKACGNDVPRLTFWLSNTIVLRTIISRTIKDSSNSAGSGRRRKTEEEGNGKITSSLRVKGLYPRKNENTALEYEGFGNWDDPQTLIPHMQHTKLTNKEVVSASRKNYRRTSSSCDQEQGNLSLYIWKNAFREACERICPIRAGGHQCGCLPMLSRLALEFVIIMEQCVARLDVAMFNAILRESADEIPTDPVSDAISDPKVLPIPPGKTSFGAGAQLKTVIGTWSRWLTDLFGMDDDDSIEDKAETDNKEERQNASLKSFSLLNALSDLLMLPKDMLLSASIRNEVCPMFNATLIKKILHKFVPDELCPDPVPSNVFEALDSENDMEDGNECVNNFPCIAATVAYSPPLATSIASIVGEMGSKSHLRRNSSSIVRKSHTSDDELDELKFPLSSIFFSVSSSPKISTKSSFKLKEIRNQSPIRYELLRDVWINSD 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00520 1034 MobiDBLite consensus disorder prediction 636 652 - -
Spst4g00520 1034 MobiDBLite consensus disorder prediction 303 334 - -
Spst4g00520 1034 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 140 IPR019448 -
Spst4g00520 1034 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 703 1033 IPR021827 GO:0005643
Spst4g00520 1034 MobiDBLite consensus disorder prediction 631 652 - -
Spst4g00520 1034 Coils Coil 511 545 - -
Spst4g00520 1034 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00520 Spst-Chr4 8083041 8089213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00520 - - vun:114181061 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00371 1 4880379 4889794 Spst4g00520 4 8083041 8089213 PCT