Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g00371 ATGTCTGATCGCGTTAAGGGGCACACGCTCCTCAATGCGCGTGACGAACTTTTTAACTCTCGACTCTCCCATAGATATGGTGGTGACCCTCTTGCAGTTCCAGGTGGTTGTTGCAGCTTACTGATTTTACCAGCCACTGCTTTCCCGATAATCACCAAATCTTGGTTGGCTGCTTCACTGGCAAAAGGGTTTCTGAGTTGTGATTGTTCAACTACATATTCAACTGCATTTAAGAAGTTTTGCTTCAAAAGGACCCTTATATTTGCGGCAGCAATGAAAGGAAAGAACAGGAGAAGTGGTGGTGCTGTTCATATGGAATACCTAATTCACATTCAGGAGATCAAGCCTTGGCCGCCATCTCAATCTCTCAGGTCTCTTCGTTCTGTATTGATACAATGGGAGAATGGCGAACGTGCTTCAGGCTCTACTGGTCGTGTTTCCCCTTCTCTCAGTCCTAATTCTGTTGCTGGTGAAGGAAAACTCGAGTTTAATGAATCGTTTAAGCTTCCTGTAACTCTGTCAAGGGATATGTCTGTCAGAAATAGTACTGCTGCGGTGTTCCAAAAGAATTGCTTGGAGTTCCACTTGTATGAGACTAGGAGAGACAAGACTGTTAAAGGGCAGTTGCTGGGGACTGCCATCATAGACTTGGCAGACTGTGGTGTACTTGGAGAGACCTTGAGCATTCGAACGCCATTGAACTGCCAGAGGAACTACAGAAACATGGATCAGCCACTTTTGTTCATTCAAATTGAGCCTGTTGAAAAGAGTCACCCTAGGTCCTCTTTGAAAGACAGCTTGTCAAAAGAGGTGCCAAAGGACAATAATGGCAGTGAATCTGTATCAGCATTGATGAATGAAGAGTATGCTGAGGAAGCTGAGATTGCCTCTTTTACTGATGATGATGTTTCCTCTCATTCATCTACGGCTGCAGTCACTACTTCATCTGAGTCTAGCGCGTGTATGCCTCCTGAACAAGAAGAGAATGCACCAAATGGATCAGCACAAAACGGTGGTAGGAATGACAAGGAGCATCTCTTGGCCTCAGAGACAAGAGTTGAGAAGTTGAATGTGATGGAACAGGATGCATGTGAGAGACTGGAGAGGCGTTCTTCCTATGTGTTATCCATGGATGTCTCCTCAGAAGTTGGGAGTCCAGTAAATGGTCATACCTCTATTACAAGCACTCCCCATCAAAGATCATTGACAACCCCAAAGCAGGTTGTTTCTTTGAATGCTGATTCTTCTTCCCCAACCTTGGAGGAAAATTCTAAGAGCAGGTTCAGAAGCAGTGAGCATGAAAATTTGGATCAGGAGGGTTGTGAACAAGTTGCCAATTGTAGAGATATGGGTACAGGTGTTCAAATAAGCATTAACGAAAGTGATTGTGACATCTATTCTAGCGACACTACATCTCTAGGTAGTAATTACCTCAGGGACAAGAATCCAAGCTTTGGTTTGGAAACCAAAGACAAATTAAGTGAGAGATGTGAGGAAGTTGATAAAAATCTTGTGCAGGAGGGGGGATGTGATACATATTACAGTTCCATCGAGGATAGGCATGGAAATGAAATGTTGCATTTTGATAAGCAGTATCATGTAGAAGAAGAATCAGTGGCACAATATGCAAAAGATCAAGCTTTATTGAGTAGCAATTCGTATTCTTTAGGTGATTCAGATAATGGTATGAAAGGAAATATTCTGAAAAATGAACGATTAAAGCATGTGAAGTCTGTAAGGTCATCAGCAGACTCAGTTAGGAGTATTGGGTCAGTTGGTAACAATCATTTCGCTGAGGTAAAGGAAAATGGTGTTAATGGAGATGTAAAAAATAATGGAGGGAATATTCGAAGCAGTGACAGAAAAGATGCCAAGGTTTATCCAAGGGAGGCCAGAAATGCCATTTTAGACAGCAAGATTGGGCACTTGGAAAACAAGATAAAAATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTGCTTTATATTCAGTTGTTGCTGAGCATGGAAGCTCCATGAGTAAGGTTCATGCTCCAGCTCGGCGCCTTTCCAGACTCTACCTTCATGCTTGTAAAGAAAATCTTCAAGCAAGAAGGGCTGGGGCTGCTAAAAGTTCTGTTTCAGGATTAGTCCTTGTTGCGAAGGCATGTGGAAATGATGTCCCAAGGTTGACATTTTGGTTGTCTAACTCCATTGTGTTGAGAACAATTATAAGCAAAACTACCAAAGATGTGACACCATCTAATCCTTCTGGATCTAGTACAAGAAGGAATAATGGAGAAGGGAAAGTTGGAAAGGTCACACAATCATTAATATGGAGAGGGTTTTCTCCTAGGAAAAACGATAATACAGCTTTTGAGTGTGGGGGTATAGGTAACTGGGATGACCCAAATGTGTTCACATCAGCATTGGAAAAGGTGGAAGCTTGGATCTTTTCTCGCATTGTGGAGTCTATTTGGTGGCAGTCTTTGACTCCGCATATGCAGCGTGCTGAAGCAAAGGTCACTCTTAAAGATTCTTTGAAAAACCATAAAAATATGTCCGGCTCATCATGTGACCAAGAGCAGGGAAATTTATCGCTGGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGACTGTGTCCTATCCGAGCTGGAGGGCATGAGTGTGGTTGTTTGTCTGTGCTGCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTGGATGTTGCTATGTTTAATGCCATTCTTCGGGAATCTGATGATGATATTCCAACTGATCCTGTGTCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTGACCGACCTATTTGGTCTGGATGATGATGATTCACTTGAGGATAGAGAGGAAGATGAACTTGACAGCAATGATGGAAGTCAAAATGCATCCTTCAAATCCTTCCATCTTCTTAATGCATTAAGCGACCTCCTGATGCTTCCTAAGGATATGTTGTTAAGTGCATCCATCAGGAAAGAGGTGTGCCCCATGTTTAGTGCATCACTAATCAAGAGGATACTGGAAAATTTTGTACCAGATGAGTTTTGCCCTGATCCAATTCCCAATGATGTTTTTGAAGCACTGGACTCACAGGATGATCATGATGATGGAAATGAGTCTATCGACAATTTCCCATGCAATGCAGCTCCGATAGTGTATTCACCTCCACCAGCAACTACCATTACAAGCATTACGGGGGAGATTGGAAGTGAATCTCAGCTAAGAAGAAGCAAATCTTCCGTTGTTAGGAAGTCATACACCAGTGATGATGAGCTCGATGAGTTAAACTATCCATTATCTTTAATATTGAATAGTGGCTCCTCCTCACCAGCATCAACAAAGTCCAATTGGAACTGGAAAGAGAGTCGCGATGAATCTGCCATCAGATACGAACTCCTCAGGGATGTTTGGATGAACAGTGAATGA 3510 0.4279 MSDRVKGHTLLNARDELFNSRLSHRYGGDPLAVPGGCCSLLILPATAFPIITKSWLAASLAKGFLSCDCSTTYSTAFKKFCFKRTLIFAAAMKGKNRRSGGAVHMEYLIHIQEIKPWPPSQSLRSLRSVLIQWENGERASGSTGRVSPSLSPNSVAGEGKLEFNESFKLPVTLSRDMSVRNSTAAVFQKNCLEFHLYETRRDKTVKGQLLGTAIIDLADCGVLGETLSIRTPLNCQRNYRNMDQPLLFIQIEPVEKSHPRSSLKDSLSKEVPKDNNGSESVSALMNEEYAEEAEIASFTDDDVSSHSSTAAVTTSSESSACMPPEQEENAPNGSAQNGGRNDKEHLLASETRVEKLNVMEQDACERLERRSSYVLSMDVSSEVGSPVNGHTSITSTPHQRSLTTPKQVVSLNADSSSPTLEENSKSRFRSSEHENLDQEGCEQVANCRDMGTGVQISINESDCDIYSSDTTSLGSNYLRDKNPSFGLETKDKLSERCEEVDKNLVQEGGCDTYYSSIEDRHGNEMLHFDKQYHVEEESVAQYAKDQALLSSNSYSLGDSDNGMKGNILKNERLKHVKSVRSSADSVRSIGSVGNNHFAEVKENGVNGDVKNNGGNIRSSDRKDAKVYPREARNAILDSKIGHLENKIKMLEGELREAAAIEAALYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLQARRAGAAKSSVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVTPSNPSGSSTRRNNGEGKVGKVTQSLIWRGFSPRKNDNTAFECGGIGNWDDPNVFTSALEKVEAWIFSRIVESIWWQSLTPHMQRAEAKVTLKDSLKNHKNMSGSSCDQEQGNLSLDIWKNAFREACERLCPIRAGGHECGCLSVLPRLIMEQCVARLDVAMFNAILRESDDDIPTDPVSDPISDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGLDDDDSLEDREEDELDSNDGSQNASFKSFHLLNALSDLLMLPKDMLLSASIRKEVCPMFSASLIKRILENFVPDEFCPDPIPNDVFEALDSQDDHDDGNESIDNFPCNAAPIVYSPPPATTITSITGEIGSESQLRRSKSSVVRKSYTSDDELDELNYPLSLILNSGSSSPASTKSNWNWKESRDESAIRYELLRDVWMNSE 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g00371 1169 MobiDBLite consensus disorder prediction 380 424 - -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 300 339 - -
Spst1g00371 1169 Coils Coil 633 660 - -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 604 624 - -
Spst1g00371 1169 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 105 220 IPR019448 -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 258 272 - -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 380 437 - -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 745 767 - -
Spst1g00371 1169 MobiDBLite consensus disorder prediction 297 341 - -
Spst1g00371 1169 ProSiteProfiles C2 NT-type domain profile. 95 255 IPR019448 -
Spst1g00371 1169 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 569 1166 IPR021827 GO:0005643
Spst1g00371 1169 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g00371 Spst-Chr1 4880379 4889794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g00371 - - gmx:100783487 1753.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00371 1 4880379 4889794 Spst1g00371 1 4880379 4889794 ECH
Spst1g00371 1 4880379 4889794 Spst4g00520 4 8083041 8089213 PCT