Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00156 ATGGAATTCTTCCAAAAGGCCAAAGTGGTGCGGTTGAGGAGCTACCACGACAAGTACATGTTGGCTGATGAGAATCAAGAGAACGTGTACCAAGATCGCAATGGTTGCTACAACAACGCCAAATGGAACGTGGAGATTTTGGAGAATTCTAATTTCATAAGGCTGAGGAGTTGCTATGGGAAATACTTAACAGCCTCAAACATGCCCCTTATAGTGAGGGGAACGGGGAAAAAGGTGTTGCAAACTTTGCCTTCAAGGTTGAACTCCTCTCTGGAATGGGAACCCATTAGAGAAGGGGTTCAAGTGAGACTAAGAACTCGTTATGGACAATACTTGCGTGCCAATGGAGGGTTACCACCTTGGAGGAACACCATCACCCATGATGTCCCCCATCGAACCTCAAAGGCCAATTGGGTTCTCTGGGACGTTGATATAGTCGAGCTTCGACCTCAGCCTCAGGTTCCTAGACCTAGACCACGACCAACACCTATTACACCACCCATCAGTCGTTCCTTGAATCCAACACCAACGGATCTTTCACCTTCTTCTTCTCCATTGATGGTGATGTCAGACACGGATTTGGTTAAGATTGATCTCCGCTCCCCCACAGCAATCGAGCCTGAAGATTCGCCAGAGTGTTTATCACCGGTGAAAGAAGGAAGGATTATATTTTATGATGTGGGTAACGAAAATGGTGATGTTGATGATGCAAAGAAAGAGGCATTTTTTACCTTTAAAGGAAGTTGTTTGAATGAGTTAGCAGATAAATTGAAAGAAGAAACGGGGCTTGATGATATTCTTGTGTGTTGCCGCAATCCATTAACTGCAAAACTTTATCCACTTCGTTTACAGTTACCTCCCAATTCCTGTGACATGCATGTGGTTGTAGTTCCTTCTTCATGCCAAGTGTCTCATTATAGTAAAGCTTTTCGGTATAAGCATGCTTATCTACCTCTTCATCTCTCTTTGTTTGGCAGCAACAGAAAGGGGTCTGAGGAAGATCTAAGGATACTTCTGAAGCAGGAAACGACGAACGCTTCTTCTAAAACAAGAAGAAGGACTTTGGTTGGAATTTGGACTGGGACCCAAAATTTGAGAGCGGTGTCGAGGAGCATTTCCGATGGCAAGTTTTGCAATAGCCGTGGGTCAGACTCTGCATGTTATGGCAACGAGACAGTGCTTCTCAGATTTGTTTATGATACTGTACTAAGTTTTGGCTTTATTATAATCAACTATGCTTCTGAGCGCCAGTTCTTTGCTGTGAAGTCAAAGGAGGAGCTGTTGGTGGTTGTTGGGGGTGGAGCAGCTGGGATGTATGGAGCGATTCATGCTAAGACTGTGGCACCCCATCTCAGTGTCGTAGTTATAGAGAAGGGAAAGCCTCTCTCCAAGGTGAAAGTTTCTGGAGGAGGACGGTGCAATGTGACTAATGGGCATTGTGTTGACAATATGATTTTGGCAGAAAACTATCCCAGAGGTCACAAGGAACTGAGAGGATATTTTTTTAATATACATGGTCCGGTGGATACAATGTCGTGGTTTTCCTCTCATGGAGTGGAGCTGAAGGTTGAGGATGATGGCAGGGTATTTCCTGTCAGTAACAACTCTTCTTCTATAATTGATTGTCTCATGTCTGAAGTGAAGCAAAGGGGAGCTGCTACCGTTCTTCCCGCATGGCTGAACTCTCAAATAGTTTCTCTGCAGACCAGGAAAACTGTAGCAGCAGTATCTATTTTATCTAGTGGCAAATTCCTTCTTGAGGTTCAGCAACACACATCTATTCATGCTGAACGTGTTGAAGCTGATTATCTATTGATTGCTAGTGGTAGTAGCCGGCAGGGTTATACTCTTGCATCTCAGCTTGGTCATTCAATTGTAGATCCAGTGCCGAGCTTGTTTACTTTCAAAATAGAAGATTCACATTTGCGGGAGTTGTCTGGGGTTACATTCCCCAAAGTTAAAGTGAGGCTAAAATTGGATAGTGTTCAAAGGAATATACCTAAGCTTACACAGGTTGGTCCCATGCTAGTTACACACTGGGGGCTCAGTGGACCAGTTATTCTTCGGTTATCTGCTTGGGGTGCTCGTTTTCTGTTCAGTTCAAGTTACAAAGGCAAACTTTTTGTTGATTTTATCCCTGATCTGCATGTGGAAAGTTTGAAGTCAATTCTTTCCCATCACAAGCTTGAATATGCGAAACAAAAGGTACTCAATTCCTGTCCTCCTGAATTTGGCATAACAAGAAGATTTTGGAGCTATGTATTGGAACGACAGGGTTTAAGTGGAGATGCCTTATGGGCTTCAATTTCAAATAGTTCATTGATGTCCATAGGTTCTTTGTTGAAGCACTGCATATTTGAAGTGACGGGCAAGGGTCAATTTAAGGATGAATTTGTTACTGCGGGTGGTGTTCCCTTGTCAGAGATACTAAATGTTGATGGGGTAACTGGTGGTTTCAATTTCCAGAATGCTTGGTCAGGAGGATTTATTGCAGGAACCACCATTGGTGGATTAGCTCTTGGATCTTGTTTAGACGCAACCGAGGCTGAACCGATCGCGAAGATGGCAGTGGAGCTCGCGGAGAAGGTCAAGATCGGCGTCTGCGTGATGGAAAAGAAGGTGAAATGTCACTCCGAGGTTCTCTCTTTCATTACACTAGATAAATCGAAAGTTTCGGATTTCGCGGTCTTCTCCGCGCCTATGGGACAGATTTTTGATAGGCTACAGGCGTTTGGTGAATTCGAGGTCATACATTTTGGGGACAAGGTGATTCTTGAAGATCCAATAGAGAGGTATTATAGTCTTATTCGTATAGCTGAAAACTAG 2826 0.4384 MEFFQKAKVVRLRSYHDKYMLADENQENVYQDRNGCYNNAKWNVEILENSNFIRLRSCYGKYLTASNMPLIVRGTGKKVLQTLPSRLNSSLEWEPIREGVQVRLRTRYGQYLRANGGLPPWRNTITHDVPHRTSKANWVLWDVDIVELRPQPQVPRPRPRPTPITPPISRSLNPTPTDLSPSSSPLMVMSDTDLVKIDLRSPTAIEPEDSPECLSPVKEGRIIFYDVGNENGDVDDAKKEAFFTFKGSCLNELADKLKEETGLDDILVCCRNPLTAKLYPLRLQLPPNSCDMHVVVVPSSCQVSHYSKAFRYKHAYLPLHLSLFGSNRKGSEEDLRILLKQETTNASSKTRRRTLVGIWTGTQNLRAVSRSISDGKFCNSRGSDSACYGNETVLLRFVYDTVLSFGFIIINYASERQFFAVKSKEELLVVVGGGAAGMYGAIHAKTVAPHLSVVVIEKGKPLSKVKVSGGGRCNVTNGHCVDNMILAENYPRGHKELRGYFFNIHGPVDTMSWFSSHGVELKVEDDGRVFPVSNNSSSIIDCLMSEVKQRGAATVLPAWLNSQIVSLQTRKTVAAVSILSSGKFLLEVQQHTSIHAERVEADYLLIASGSSRQGYTLASQLGHSIVDPVPSLFTFKIEDSHLRELSGVTFPKVKVRLKLDSVQRNIPKLTQVGPMLVTHWGLSGPVILRLSAWGARFLFSSSYKGKLFVDFIPDLHVESLKSILSHHKLEYAKQKVLNSCPPEFGITRRFWSYVLERQGLSGDALWASISNSSLMSIGSLLKHCIFEVTGKGQFKDEFVTAGGVPLSEILNVDGVTGGFNFQNAWSGGFIAGTTIGGLALGSCLDATEAEPIAKMAVELAEKVKIGVCVMEKKVKCHSEVLSFITLDKSKVSDFAVFSAPMGQIFDRLQAFGEFEVIHFGDKVILEDPIERYYSLIRIAEN 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00156 941 Gene3D - 716 782 IPR023166 -
Spst4g00156 941 Gene3D Translation factors 629 799 - -
Spst4g00156 941 MobiDBLite consensus disorder prediction 151 185 - -
Spst4g00156 941 SUPERFAMILY Actin-crosslinking proteins 5 145 IPR008999 -
Spst4g00156 941 Gene3D - 857 935 - -
Spst4g00156 941 MobiDBLite consensus disorder prediction 152 170 - -
Spst4g00156 941 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Spst4g00156 941 PANTHER OS12G0638800 PROTEIN 421 840 IPR004792 -
Spst4g00156 941 SUPERFAMILY FAD/NAD(P)-binding domain 429 835 IPR036188 -
Spst4g00156 941 NCBIfam aminoacetone oxidase family FAD-binding enzyme 429 832 IPR004792 -
Spst4g00156 941 Gene3D - 9 126 - -
Spst4g00156 941 MobiDBLite consensus disorder prediction 171 185 - -
Spst4g00156 941 Gene3D - 429 809 IPR036188 -
Spst4g00156 941 Pfam HI0933-like protein 428 833 - -
Spst4g00156 941 SUPERFAMILY HI0933 insert domain-like 628 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00156 Spst-Chr4 1515979 1542411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00156 - - gmx:100802042 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00156 4 1515979 1542411 Spst1g01288 1 15608537 15610928 PCT