Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01288 ATGGCTGCGACTTTATTCTTCGAACAGTTTTTTGCGTTCGGGATGGTGGAGGAGATGGATGAGGAAGGAGTTATGGCGGCGAAGAAGATAACGATTGGAGTCTGCGTCATGGAAAAGAAGGTGAAATGTGGCTACGAGGCAGAAGTGGTGCGTCTAAGGAGTCACCATGACAAATATTTGTTAGCAGACGTTGACAAAGTGGGTGTCTACCAAGACCGAAATGGGACATACAACAATGCGAAATGGACGGTGGAAATCGTGGCGGGTGCCAACTTGATAAGACTGAAGAGTTGCTATGACAAATACTTAACAGCCTCCAACGTACAATTTTTGTTAGGTACCACAGGGAAGAAAGTGTTGCAAACCCTTCCCACAAGGTTAAACTCCTCTTTGGCGTGGGAACCCATAAGAGAAGGTGCGAAGGTCAGGCTTAGAACACGTTATGGACGGTTTTTACGCGCCAATAAAGGCTTACCACCCTGGAGAAACTCTATCACCCACGACATCCGACAGCAGAAATCAACGTCAAATTGGGTTCTCTGGGATGTCGACCTCGTACAGCTTCGACTAACCCCTCCCGCACCAATCCTCACACTCAATCCTGCAGATGCTGCCATGTTAGAATCTCCTCCTTATGCCGATGATGCCTCCTTTAGTTTCCATCGCAGGTCTCCTGATCTATCAACTCAGGAATTGAAGGAGAAGTTAAAGGAAGAGACAGGGTATGATGACATTGTTGTGTGTTCCCGCAACCCACTTTATCCCAAACTTTATCCCCTGATTTCAATTGCCTCCTAA 798 0.4699 MAATLFFEQFFAFGMVEEMDEEGVMAAKKITIGVCVMEKKVKCGYEAEVVRLRSHHDKYLLADVDKVGVYQDRNGTYNNAKWTVEIVAGANLIRLKSCYDKYLTASNVQFLLGTTGKKVLQTLPTRLNSSLAWEPIREGAKVRLRTRYGRFLRANKGLPPWRNSITHDIRQQKSTSNWVLWDVDLVQLRLTPPAPILTLNPADAAMLESPPYADDASFSFHRRSPDLSTQELKEKLKEETGYDDIVVCSRNPLYPKLYPLISIAS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01288 265 Pfam Domain of unknown function (DUF569) 46 181 IPR007679 -
Spst1g01288 265 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 46 261 - -
Spst1g01288 265 SUPERFAMILY Actin-crosslinking proteins 49 185 IPR008999 -
Spst1g01288 265 Gene3D - 49 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01288 Spst-Chr1 15608537 15610928 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01288 - - gmx:121172858 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01288 1 15608537 15610928 Spst1g01288 1 15608537 15610928 ECH
Spst4g00156 4 1515979 1542411 Spst1g01288 1 15608537 15610928 PCT