Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04663 ATGAGCACCTGTCCGGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTGCACAAGGACTATTCAAATCTATCGCCAATTCACTTTCACTACCAATTCATGGACTATAACGTAGACCTCTCTTGCCAATTAAATGAAATTCTGCCTGGATTCAGGAGCCTTTTCAAATGCACCATACCTGATTCTGGGAAGGTGGAGATACACCACTTGACTAACTACACTGGGATTACTGGATGCATTGGACTAGAAGGAAACCTAGAAAAAGGATATGACCCTGTTCTAAACTTGTCGGGTCTATTGGGAACAAACATTTTGTCCCTTGGAGCCAATGTTGCTTTAGACATACCAACGAGAACATTCAGTAATCTGAATGCTGGATTAGGCCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCATGCATGACAGTTTTGACATTCTGAAAGCCTCCTGTTATCATGAAGTGAACCCCCTAAGCAAGACTGCCATTGCAGCAGAGCTGAAGCATAGCTTGTCAATGGGGGAGACTAGTGCTACCATTGGTGCTCAGCATGCATTTTTACCGCAAACGTTGGTAAAGGCTCGATTTGACACCTTTGGCAAGGCAGGTGCTGTTATTCAACAAGAGTTCTGGGAGAGATTTTTTGTATCTATGGCTGGAGAAGTGGATTTTAAGAACTCAGATAATAATTTGCATCCCAAGGTTGGAGTCTCAGTGGCTTTGAAACCCTAG 738 0.4322 MSTCPGIYFDIGKKAKDVLHKDYSNLSPIHFHYQFMDYNVDLSCQLNEILPGFRSLFKCTIPDSGKVEIHHLTNYTGITGCIGLEGNLEKGYDPVLNLSGLLGTNILSLGANVALDIPTRTFSNLNAGLGLNTPFLVASLTMHDSFDILKASCYHEVNPLSKTAIAAELKHSLSMGETSATIGAQHAFLPQTLVKARFDTFGKAGAVIQQEFWERFFVSMAGEVDFKNSDNNLHPKVGVSVALKP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04663 245 CDD Porin3_VDAC 5 244 IPR001925 GO:0005741|GO:0008308|GO:0098656
Spst3g04663 245 Gene3D Porin 2 244 IPR023614 -
Spst3g04663 245 FunFam Mitochondrial outer membrane protein porin 1 isoform A 2 244 - -
Spst3g04663 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 39 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Spst3g04663 245 Pfam Eukaryotic porin 36 237 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04663 Spst-Chr3 98453265 98455270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04663 K15040 - gmx:100787061 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04663 3 98453265 98455270 Spst9g02319 9 54407516 54409172 ECH
Spst1g01294 1 15682162 15685870 Spst3g04663 3 98453265 98455270 ECH
Spst3g04663 3 98453265 98455270 Spst3g04663 3 98453265 98455270 ECH