Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01294 ATGGCTAAGGGTCCCGGTCTCTACTCTGACATCGGCAAGAAAGCCAGGGATCTGCTTTTCAAGGACTACCAAAGTGACCAGAAGTTCACCGTCACCACCTTCTCACCCACTGGAGTTGCTATTACTTCATCAGGAACCAGGAAAGGCGAACTGTTTGTGGCTGATGTGAACACTCAGTTGAGGAACAAAAACATCACTACTGACATCAAAGTTGATACAGATTCTAATCTCTTCACAACTATCACTGTCAATGAACCAGCTCCTGGTCTTAAGGCTATCTTTAACTTCAAAGTTCCTGACCAAAGGTCCGGAAAGGTGGAACTTCAGTACTTGCATGATTATGCTGGAATAAGCACGAGCATTGGGTTGACAGCAAACCCAATTGTCAACTTCTCTGGTGTTGTAGGAACCAATGTTCTTGCTCTTGGTGCTGATCTTTCTTTTGACACCAAAATTGGGGACTTAACCAAATCCAATGCTGGACTGAGCTTCACCAAGGATGACTTAATTGCCTCATTGACTCTGAATGACAAAGGCGATGCTCTGAATGCTGCATATTATCATGTAGTTAACCCCTTGACCAACACTGCTGTTGGTGCTGAGGTCACTCATCGATTTTCAACTAATGAGAACACTCTCACCCTTGGTACCCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTGAACAACTTTGGCAAGACTAGTGCTCTCATCCAGCATGAGTGGCGTCCCAAGTCGTTCTTTACCATTTCTGGTGAGGTTGACACCAAGGCCATTGAAAAGAGTGCCAAGGTTGGATTGAGTTTGGTTCTCAAACCCTAA 831 0.4501 MAKGPGLYSDIGKKARDLLFKDYQSDQKFTVTTFSPTGVAITSSGTRKGELFVADVNTQLRNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSIGLTANPIVNFSGVVGTNVLALGADLSFDTKIGDLTKSNAGLSFTKDDLIASLTLNDKGDALNAAYYHVVNPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKTSALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01294 276 Gene3D Porin 1 275 IPR023614 -
Spst1g01294 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Spst1g01294 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Spst1g01294 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Spst1g01294 276 FunFam Outer mitochondrial membrane protein porin 1 275 - -
Spst1g01294 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01294 Spst-Chr1 15682162 15685870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01294 K15040 - gmx:100170728 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01294 1 15682162 15685870 Spst1g01294 1 15682162 15685870 ECH
Spst1g01294 1 15682162 15685870 Spst3g04663 3 98453265 98455270 ECH
Spst1g01294 1 15682162 15685870 Spst9g02319 9 54407516 54409172 ECH