Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04358 ATGGAGTGGCCAGCATGTACGGACGAGTACGAGAAGCTCGTAAATCGCATGAGCACTCCCAGGGTCGTCATAGATAATGCCGTGTGCTCTACTGCAACAATAGTCAAGGTTGATAGCGGCAGAAAACATGGGATTCTTTTGTATGCCGTACAAGTGCTTTCTGATCTGAACCTTTCAATTAAGAAGGCTTACATCTCCTCTGATGGCAGGTGGTTCATGGATGTTTTTCATGTCACTGATCAAAACGGAAACAAGCTAACCGATGAGAGCGTTTTGAGATATATTGAACAGTCCCTTGGCGGAATTCACAGTGGGAATACCAATGACTTAAATGGTCTCACTATCCTTGAATTAACCGGCACGGACCGCGTTGGTCTTCTTTCGGAGGTATTTGCTGTACTAGCTGAGCAGCAATGTGATGTTGTTGATGCTAAGTTTTGGACTCATAATGGCCGGATTGCCTCCTTAATCTATGTGAAGGACAGCAATGCTGGGTCTCTTATGGAGGACTCTCAGAGAATTAGTACAATTGAAGCACGTTTAAGAAATGTTTTAAAGGGTGACAATGATATTAGAAGTGCAAAAACTTCCATCACTGATGCCGTTGTGCACACCGAAAGAAGGTTGCACCAAATGATGTACACTGACCGTGATTACCAGAGGAATCCCATTTTCAAGTTTACTTCCGATACCCCAATAGTCACGGTCCAAAATTGGGCGGAAAGGGGTTATTCAGTTGTCAATATTCAGTGCAAGGATCGAATTAAACTTTTGTTTGATGTCGTGTGCAATTTGACTGACATGGAATATGTTGTGTTCCATGCAACTATTAACACAACAGTTGACCAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACCCCAATTAGTTCAGAACCAGAACGTCATCGTGTGATTCAATGCCTGCAAGCTGCAGTGGAGAGAAGGGCATTTGAGGGTGTTAGGCTAGAGTTATGCATGAAAGATAGACAGGGGCTTCTTGCTGAAGTGATGAGAACTTTTCGAGAGAATGGGCTGAATGTGACAAGGGCTGAGATATCTACCATTGGGGACATGACATCAAATGTTTTTTATGTAACGGATGCGATAGGATACCCTGCTGATCCAAAAATCATCGAATCTGTTAGGCAGAAAGTTGGGTTGAGCAATTTAAAAGTGAAGGAGGTAGCATTGGTATGCCATGAGAAGGCAGAAAGGGAAGATGAAGCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTGGTGAGAAGGAATCTTTACAATTTGGGTTTGATAAAATCGTGTTCTTGA 1326 0.4359 MEWPACTDEYEKLVNRMSTPRVVIDNAVCSTATIVKVDSGRKHGILLYAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDESVLRYIEQSLGGIHSGNTNDLNGLTILELTGTDRVGLLSEVFAVLAEQQCDVVDAKFWTHNGRIASLIYVKDSNAGSLMEDSQRISTIEARLRNVLKGDNDIRSAKTSITDAVVHTERRLHQMMYTDRDYQRNPIFKFTSDTPIVTVQNWAERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTTVDQAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAFEGVRLELCMKDRQGLLAEVMRTFRENGLNVTRAEISTIGDMTSNVFYVTDAIGYPADPKIIESVRQKVGLSNLKVKEVALVCHEKAEREDEAVGVGGAVLLCLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04358 441 CDD ACT_ACR_3 244 318 - -
Spst3g04358 441 SUPERFAMILY ACT-like 29 96 IPR045865 -
Spst3g04358 441 Pfam ACT domain 324 375 IPR002912 -
Spst3g04358 441 SUPERFAMILY ACT-like 111 186 IPR045865 -
Spst3g04358 441 Gene3D - 322 394 - -
Spst3g04358 441 Gene3D - 113 188 - -
Spst3g04358 441 CDD ACT_ACR_1 32 100 - -
Spst3g04358 441 ProSiteProfiles ACT domain profile. 324 403 IPR002912 -
Spst3g04358 441 CDD ACT_ACR_4 322 393 - -
Spst3g04358 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
Spst3g04358 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Spst3g04358 441 Pfam ACT domain 115 162 - -
Spst3g04358 441 SUPERFAMILY ACT-like 322 391 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04358 Spst-Chr3 95211434 95213963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04358 - - gmx:100794729 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01577 1 19642001 19644533 Spst3g04358 3 95211434 95213963 ECH
Spst3g04358 3 95211434 95213963 Spst3g04358 3 95211434 95213963 ECH