Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04310 ATGAGCACTGGGGAGCTCCTCGACATCGAACCTCTCGAACTCAAGTTCCCCTTTGAACTCAAGAAGCAGATCTCATGTTCTCTTCAATTGTCTAATAAGACCGATGCCTATGTAGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGGTCTACATGTGATGTTATGGTTACCATGCAAGCACAAAAAGAGGCTCCACCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTGTTGATGGTGCCAGTCCGAAGGATATCACTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCTCCTCAACCACCATCTCCAGTACCAGAAGGTTCTGAGGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAACGGAAATGCCAATGGTTCTGACTTCACACAAGTAGCAAGAGCATTTACTGAACGACCTGAGTCTCACGACAAATCTGCAGAGGCTAGAGCTCTTATCTCAAGGCTGAATGAAGAAAAGAATAATGCAATTGAACAAAATAACAAGCTCCGCCAGGAACTGGATCTACTGAAGCGGGAAGGCAACAAAAGTCGTGGTGGAGTCTCATTTGTCATTGTCGTATTAATTGGCTTGCTTGGCATAATTATGGGGTATCTCTTCAAGAAGACCTAA 726 0.4449 MSTGELLDIEPLELKFPFELKKQISCSLQLSNKTDAYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPPDMQCKDKFLLQSVKTVDGASPKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQVARAFTERPESHDKSAEARALISRLNEEKNNAIEQNNKLRQELDLLKREGNKSRGGVSFVIVVLIGLLGIIMGYLFKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04310 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Spst3g04310 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Spst3g04310 241 Coils Coil 177 211 - -
Spst3g04310 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Spst3g04310 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Spst3g04310 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Spst3g04310 241 MobiDBLite consensus disorder prediction 127 158 - -
Spst3g04310 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Spst3g04310 241 MobiDBLite consensus disorder prediction 143 158 - -
Spst3g04310 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04310 Spst-Chr3 94711405 94713976 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04310 - - gmx:100527687 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04310 3 94711405 94713976 Spst3g04310 3 94711405 94713976 ECH
Spst3g04310 3 94711405 94713976 Spst3g04248 3 93995139 94009388 PCT