Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04248 ATGGCGAGAGGGCCAAACGTCGCAATGGTTGATGAATTCAGAGACTGCCACGTGGAAACAAACTTTGATCTCTTCGTCATGACAGCTTCTGTTGCAAATTCGTTGATAACCGTTAACCCTGATGAGCTTCGCTTCCAAGTTGAGCTGGACAAGCAGACATATTGCGATCTAAAAGTTCTGAATAACACAGAGCACTACGTTGCCTTTAAGGTCAAAACCACTTCGCCAAAGAAGTACTTTGTACGGCCTAATACTGGTGTTGTACATCCATGGGACTCGTGTATCATCAGAGTCACCCTCCAGGCCCTACAAGAATACCCTCCAGATATGCAATGCAAGGATAAATTTCTCTTACAGAGTACAGTAGTGAATCCAAACACCGATGTTGATGATCTTCCGCCAGACACTTTTACTAAGGATAGTGAAAAGTCAATAGAGGATTTGAAACTAAGAGTGGTATATATCTCTCCTACGTCACCCAACGGAAGCACAGAATATGATACAGCCAAGACCCATAAACTTGATTCTTATTCTTCAGACCGTACTGCACCTGAAGGAGGAGAGAGATGCTGTTGTCTTGCAAACGCGGCAACTGCAACAGGAATTGGATATGCTGAAAAGGCGAAAAAGTCGTCGAGGGGATCCAGGCTTTTCCTTCACTTTTGCATTGTTCGTGGGTCTGATTGGATTGTTGACTGGTTTACTTTTAAAACTTTCACTGTCTTCACCACCAAGAGAATGATTTCACTCTGTTCAGAACCTTTGCATGCAGACCCTTTCCTCCCATTAACTCGATACGATTCCTTGTTCTCAATGGAGGCTTTCTTCAATTCCCAATCGTCTTCGAGAAGTCGGTGGAGTTACGATACTCTCAAGAATTTCCGCGAGATCTCTCCGGTGGTTCGGAATCACATCAAACGGGTTTATTTTACGTTATGTTGCGCTGTGGTGGCTGCTGCTGTTGGAGCCTTTCTTCATGTATTATGGAACATTGGGGGTTTTCTCACTACGGTGGGGTCTATTGGAACCATGGTTTGGTTGCTATCAACGCCCCCTTTTGAAGAGCAAAAGAGGTTGTCTCTGTTGATGGCTTCGGCCCTGTTTCAGGGCGCTTCCATTGGACCTCTGATTGAATTGGCGATAGCCATCGATCCTAGCCTCATCTTTAGCGCTTTCGTGGCAACTTCCTTGGCTTTTGGTTGTTTCTCTGCGGCAGCTTTAGTTGCAAGGCGTAGGGAGTATCTCTACCTTGGTGGTTTGCTTTCTTCTGGGCTGTCCATTCTTATGTGGTTGCACTTTGCTTCCTCTCTCTTTGGTGGCTCAATAGCGCTCTTTAAGTTTGAGTTGTACTTTGGGCTTTTGGTGTTTGTAGGCTACGTCATAGTAGATACTCAAGAAATTATTGAGATGGCTCACTTCGGTGACCTGGATTATGTGAAGCATGCGTTGAATCTGTTCACTGATTTGGTTGCAATCTTTGTGCGGATTCTTATTATAATGTTGAAGAATTCATCCGAGAGAAATGAGAGGAAGAAGAAAAGGAGAGACTAA 1551 0.4449 MARGPNVAMVDEFRDCHVETNFDLFVMTASVANSLITVNPDELRFQVELDKQTYCDLKVLNNTEHYVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQALQEYPPDMQCKDKFLLQSTVVNPNTDVDDLPPDTFTKDSEKSIEDLKLRVVYISPTSPNGSTEYDTAKTHKLDSYSSDRTAPEGGERCCCLANAATATGIGYAEKAKKSSRGSRLFLHFCIVRGSDWIVDWFTFKTFTVFTTKRMISLCSEPLHADPFLPLTRYDSLFSMEAFFNSQSSSRSRWSYDTLKNFREISPVVRNHIKRVYFTLCCAVVAAAVGAFLHVLWNIGGFLTTVGSIGTMVWLLSTPPFEEQKRLSLLMASALFQGASIGPLIELAIAIDPSLIFSAFVATSLAFGCFSAAALVARRREYLYLGGLLSSGLSILMWLHFASSLFGGSIALFKFELYFGLLVFVGYVIVDTQEIIEMAHFGDLDYVKHALNLFTDLVAIFVRILIIMLKNSSERNERKKKRRD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04248 516 CDD BI-1 294 505 - -
Spst3g04248 516 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 172 IPR016763 GO:0005789
Spst3g04248 516 SUPERFAMILY PapD-like 33 162 IPR008962 -
Spst3g04248 516 Pfam Inhibitor of apoptosis-promoting Bax1 302 500 IPR006214 -
Spst3g04248 516 FunFam Vesicle-associated protein 1-1 30 158 - -
Spst3g04248 516 Pfam MSP (Major sperm protein) domain 36 131 IPR000535 -
Spst3g04248 516 Gene3D Immunoglobulins 28 159 IPR013783 -
Spst3g04248 516 ProSiteProfiles Major sperm protein (MSP) domain profile. 35 155 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04248 Spst-Chr3 93995139 94009388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04248 K21889 - gmx:100795508 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04310 3 94711405 94713976 Spst3g04248 3 93995139 94009388 PCT