Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04252 ATGATGCAGATCAGCTCCACCATACCGGCACACAACCTTCACATGTTCCAAACAAGACGCGCCAGTTTCCGATGCCGTGCCTCCCCCCTCAACCCTGCTTCCACCAACCCACTCCCAACCAACTCTTCTCCTCAGTCCGCCAAACCGCTCACCTCCACCGACTCCACGCGCTTGCACCTCTCAAACCTCGACAAGTTACTCCACAAGCAATCACCGACTCAACTCAACCACCCACCACCACAGCATCAGGAACAACTCGCAATTCAAAGCACCAACCACAAGTCAGCGCCAGCAGTGGAGAAGAAGGGAAAGAATATTCTGGAAGGCCTCAACCTGGCCCGTCTCTGGCCGGACATGAAAGCCACTGAGGAAATGTCGCCGCGCCACCTCAACCGCCTCCAGCGGCTGCTCTCCAAGACGGCGGAGTACTCCCCGCGGAACATCCTCGGCAGCCGGTGGAGAGAGTACCACGGCAGCGACGACTGGAAAGGCATGCTGGACCCTCTGGATGAAAATCTCCGGCGAGAGGTGGTGCGCTACGGCGAGTTCGTGCAAGCCGCGTACCATTCCTTCCACTCCAACCCTGCCATGTCAGCAGAGGAGCCACCCCTCCCGCGCCACATGGTCCTACCCGACAGATCCTACAGGGTCACCAAATCCCTCTACGCCACGTCATCAATCGGGTTACCCAAATGGGTGGACGACGTCGCCCCGGATCTGGGCTGGATGACCCAGCGCTCGAGCTGGGTCGGGTTCGTGGCGGTTTGCGACGACAGGAGAGAGATTGCGCGTTTAGGGAGGCGAGATATCGTCATCTCCCTCCGTGGAACCGCGACGTGTCTGGAGTGGGCCGAGAACATGAGAGCCCAATTGATAAACATATCCGAAGAAACGGGTGAAGGGAAGCCCAAGGGCGAGCCCAAAGTGGAGTGCGGGTTTTTGAGCCTATATAAAACGAGAGGCACCCACGTGCCTAGTTTGGCGGAATCGGTGATCGAGGAGGTGAAGCGGTTGATGGAGCTCTACAAAGGGGAAACACTAAGCATTACAATCACTGGACATAGTTTAGGTGCAGCACTGGCTCTATTAGTGGCCGATGACGTGAGCGCAGCAAGCGGTGACGTGGCACCAGTGGCTGTTTTTTCGTTTGGTGGGCCGAGGGTGGGTAACAAGGCCTTTGGAGAGAAAATGACGGCCCAAAACGTGAAAGTGCTGCGAATCGTGAATTCGCAGGATGTGATAACGAGGGTTCCTGGGATTTTTGTGAGTGAAGAGGTTGAAAAGAAACTGAGAAGCTCAAAGGTTGGGGGTGTACTGAATATGGTGGACGAGTACACGCACATGGGAACAGAACTGCGGGTGGAGACGAAGATGTCGCCGTATTTGAAGCCGGATGCTGACATGGCATGCTGTCATGACTTGGAGGCTTACCTGCACCTTGTAGATGGGTTTTTGGCTTCGAATTGTCCTTTTAGAGCGAATGCAAAGAGAAGCTTGGCTAGGTTAATGCAGGATCAGGGTGGCAATGTAAAAAAATTGTATACCAGCAAGGCTAAGGCCTTGACTGTCAACCTTGAACGACAGGGATCTTTCTCTATCTCTGGTTGTTTGCCTAGTCCCTCCTAA 1626 0.5486 MMQISSTIPAHNLHMFQTRRASFRCRASPLNPASTNPLPTNSSPQSAKPLTSTDSTRLHLSNLDKLLHKQSPTQLNHPPPQHQEQLAIQSTNHKSAPAVEKKGKNILEGLNLARLWPDMKATEEMSPRHLNRLQRLLSKTAEYSPRNILGSRWREYHGSDDWKGMLDPLDENLRREVVRYGEFVQAAYHSFHSNPAMSAEEPPLPRHMVLPDRSYRVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGFVAVCDDRREIARLGRRDIVISLRGTATCLEWAENMRAQLINISEETGEGKPKGEPKVECGFLSLYKTRGTHVPSLAESVIEEVKRLMELYKGETLSITITGHSLGAALALLVADDVSAASGDVAPVAVFSFGGPRVGNKAFGEKMTAQNVKVLRIVNSQDVITRVPGIFVSEEVEKKLRSSKVGGVLNMVDEYTHMGTELRVETKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQGGNVKKLYTSKAKALTVNLERQGSFSISGCLPSPS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04252 541 CDD Lipase_3 204 482 - -
Spst3g04252 541 MobiDBLite consensus disorder prediction 28 54 - -
Spst3g04252 541 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 55 518 - -
Spst3g04252 541 MobiDBLite consensus disorder prediction 27 54 - -
Spst3g04252 541 SUPERFAMILY alpha/beta-Hydrolases 174 484 IPR029058 -
Spst3g04252 541 Pfam Lipase (class 3) 271 420 IPR002921 GO:0006629
Spst3g04252 541 Gene3D alpha/beta hydrolase 152 531 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04252 Spst-Chr3 94039753 94041378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04252 12 541 Acyl Lipid Metabolism Gene Families AT4G16820 54.963 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04252 - - gmx:100778514 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04252 3 94039753 94041378 Spst10g01223 10 12992824 13000559 PCT