Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01223 ATGTCACATGCCATGCAACAGAACCCACCGGCGCCGAAATTGAAGCGGAGGAGGGGAAAAGATTTGATCTTTTTAATCAAGGGGCTTCTGGGGTTTGCGAGGATGAGGCTCAATGGAGAAATCTCAAGCGGAGAAGACGAAGAAGAGAAGGAAGCCGGAACGACGATGTTTTCGGCGCAGAAAGTGGTGGTTGGGTATGCCTTAACGTCAAAGAAGAAAAGAAGCTTTCTGCAGCCAAGTTTCACTGCCCTTGCACGGAACAAGGGGATATACTTCGTCGCTGTTGATCTAAACAAACCACTACCAGAACAAGGTCCTTTTGATATTATCTTGCATAAGTTATCAGGGGAGGAGTGGCATGAGATTATTGAGGATTATAGGCAAAAACATCCTGAGGTAACTGTCCTTGATCCTCCCGATGCAATTCAACATTTACACAATCGCCAATCCATGCTGCAAGATGTGGTGGATCTGAACTTATCTGACTGCCATGGCAAGGTTGGCATTCCACGTCAGCTAGTTATCACAGAAGAGAAAGACCCCTCTAGCATTCCTTATGAAGTCGCCAAAGCTGGGATGAAGTTGCCATTAGTTGCAAAACCACTAGTTGTGGATAGTACTGCAAAGTCACATGAACTATTTCTTGCTTATGACGAATTCTCTCTATCAGAGCTTGAACCTCCGCTGGTTCTACAGGAGTTTGTCAATCATGGTGGTCTTCTCTTTAAGATTTACATTGTTGGGGAAACCATAAAGGTTGTGAGGCGTTTCTCTCTTCCTAATATCAGTAAGCGTGAACTATCAAAAGTTGCAGGTGTATTCCGTTTCCCAAGAGTTTCATGTGCAGCAGCTTCTGCAGATGATGCTGATCTAGATCCTAATATAGCAGAACATCCACCGCGTCCATTATTGGAGAGGCTTGCCAAGGAGCTCCGTCATAGATTGGGACTCCACTTGTTCAACATAGATATGATTAGAGAATATGGAACCAAGGATGTGTTTTACGTCATAGACATCAACTACTTTCCAGGGTATGGGAAAATGCCAGATTATGAGCACGTATTTACAGATTTTCTACTTAGCCTGGTGCAGAGCAAGTATAAGAAGAAACTTACTACCTAA 1122 0.4394 MSHAMQQNPPAPKLKRRRGKDLIFLIKGLLGFARMRLNGEISSGEDEEEKEAGTTMFSAQKVVVGYALTSKKKRSFLQPSFTALARNKGIYFVAVDLNKPLPEQGPFDIILHKLSGEEWHEIIEDYRQKHPEVTVLDPPDAIQHLHNRQSMLQDVVDLNLSDCHGKVGIPRQLVITEEKDPSSIPYEVAKAGMKLPLVAKPLVVDSTAKSHELFLAYDEFSLSELEPPLVLQEFVNHGGLLFKIYIVGETIKVVRRFSLPNISKRELSKVAGVFRFPRVSCAAASADDADLDPNIAEHPPRPLLERLAKELRHRLGLHLFNIDMIREYGTKDVFYVIDINYFPGYGKMPDYEHVFTDFLLSLVQSKYKKKLTT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01223 373 Gene3D - 138 344 - -
Spst10g01223 373 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 138 348 - -
Spst10g01223 373 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 59 368 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Spst10g01223 373 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 63 142 IPR041429 -
Spst10g01223 373 PIRSF ITPK 42 373 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Spst10g01223 373 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 164 360 IPR040464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01223 Spst-Chr10 12992824 13000559 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01223 K00913 - gmx:100779381 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04252 3 94039753 94041378 Spst10g01223 10 12992824 13000559 PCT