Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03779 ATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAGCAAATGGATAAATTAATTCACTATGTCAATGAGGATGGTAGAGTAAATGCTTTGTATTCCACTCCATCAATTTACACCAAAGCCAAAAATGCTGCTAATCAAACTTGGCCACTGAAAACTGATGATTACTTCCCGTATGCTGATCGTGCTAATGCTTATTGGACTGGCTATTTCACGAGTCGCCCAGCCTTAAAGCGATATGTTAGGATGATAAGTGGATACTATCTGGCAACGCGTCAACTTGAATTTTTCGTTGGAAAGCAATCAACTAAATACAATACTATTGGCCTTGGAGATGCTCTAGGAATTGCACAACACCATGATGCTGTCAGTGGTACTGCCAAACAGCATACAACCAATGACTATGCCAAACGACTGGCTATTGGAGTCTCTGAGGCTGAAGCAGTTGTTAGTTCTTCCTTGGCTTGTCTTACTAGCAACCTATCAAGTGATCAATGTTCAGCACCTGCATCGGCATTTGCCCAGTGTCAATTGTTAAATATCAGTTACTGCCCTCCTACTGAAGATAGCATTCCAGATGCTAAGAGTTTGGTAGTTGTGGTGTATAACCCACTTGGATGGAAACGTACTGATATTGTCAAAATACCAGTTAATGATGCTAATCTTGTCGTCAAAGATTCACTGGGCAATAATCTTGAAGTACAATATGTGGATGTAGATGATGTTACTACAAATTTAAGAAAATTATATGTGAAGGCCTATTTGGGGGTGTCACCAAAACAAGCCCCAAAGTACTGGCTTTTGTTTCAGGCGTCAGTACCTCCGCTTGGATGGAGCACGTACTTCATTTCTAAAGCAACCGGAAAAGGGACCAGAACAGAAGATATATCTCAACTCAGCAGTCAGAAGGGTGAGACCATTATCATTGGGCCTGGAAATTTAAAGATGTCCTTTTCCTCAACCTCTGGACAACTCAAAAGGATGTATAATTCCAGAACTGGAGTTGATATACCTATTCAGCAAAGCTATCTCTGGTATGGATCTAGTGAGGGTGATAGTGATCCTCAGGCTTCTGGAGCATATATATTCCGGCCTAATGGATCCCCTCCAACTATCGTTTCAAGATCAGTGCCCACCAAGATAATCCGTGGACCACTAGTTGATGAAGTTCATCAGAATTTTAGCTCTTGGATTTATCAGGTTACTAGGCTTTACAAAGACAAAGAGCATGCTGAAATCGAATTCACTATTGGTCCGATTCCTACTGATGATGGAGTTGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTATTATACTGATTCCAACGGGAGAGATTTTCTAAAACGAGTTCGAGATCATAGAGATGATTGGCCCCTTCAAGTAACTCAACCAGTAGCAGGAAACTATTACCCACTTAATCTTGGAATTTATACCAAGGATAAGAAATCCGAGTTCTCGGTCTTAGTTGATCGTGCCACTGGTGGAGCTAGCATCATAGATGGTGAGGTGGAATTGATGCTTCATAGGCGTATTCTCCATGATGATGGTCGAGGAGTTGGGGAACCACTTGATGAACAAGTTTGCGTGGACAATAACAAAATATGTGAAGGACTAACAGTCCGAGGAAATTATTATATCAGCATAGACAAACTTGGAACTGGTGCACGCTGGCGCCGTACAACTGGTCAGGAAATCTACTCACCATTCTTATTGACTTTTACGCATGAGAACTTGAATAGTTGGAAGTCCTCTCATGTGACCAAAGGAACAATCATGGATCCAAATTACAGCTTGCCCCCCAATGTGGCTCTGATAACTCTTGAGGAGTTGGATGGTGGAATTGTGCTTCTCCGTTTGGCACATCTATATGAGCCAAGTGAATATGCTGAGTATTCAACTCTAACCAAAGTTGAACTGAAGAAGTTGTTTGCCAAGAAAACGATAAAGGAGTTGAAGGAGGTAAGCTTATCTGCTAACCAAGAGAAGTCAGAAATAAAGAGGATGACATGGAAGGTTGAAGGGGACAATGGACAAGGACCTCAAGGACTTAGGGGTGGCCCTGTCAACAACCCTAATTTGGTTGTTGAGCTTGGCCCCATGGAAATACGAACTTTCCTATTGAAATTTTAA 2157 0.4182 MGDDFQYQYAESWFKQMDKLIHYVNEDGRVNALYSTPSIYTKAKNAANQTWPLKTDDYFPYADRANAYWTGYFTSRPALKRYVRMISGYYLATRQLEFFVGKQSTKYNTIGLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGVSEAEAVVSSSLACLTSNLSSDQCSAPASAFAQCQLLNISYCPPTEDSIPDAKSLVVVVYNPLGWKRTDIVKIPVNDANLVVKDSLGNNLEVQYVDVDDVTTNLRKLYVKAYLGVSPKQAPKYWLLFQASVPPLGWSTYFISKATGKGTRTEDISQLSSQKGETIIIGPGNLKMSFSSTSGQLKRMYNSRTGVDIPIQQSYLWYGSSEGDSDPQASGAYIFRPNGSPPTIVSRSVPTKIIRGPLVDEVHQNFSSWIYQVTRLYKDKEHAEIEFTIGPIPTDDGVGKEVITRMTANMATNKEYYTDSNGRDFLKRVRDHRDDWPLQVTQPVAGNYYPLNLGIYTKDKKSEFSVLVDRATGGASIIDGEVELMLHRRILHDDGRGVGEPLDEQVCVDNNKICEGLTVRGNYYISIDKLGTGARWRRTTGQEIYSPFLLTFTHENLNSWKSSHVTKGTIMDPNYSLPPNVALITLEELDGGIVLLRLAHLYEPSEYAEYSTLTKVELKKLFAKKTIKELKEVSLSANQEKSEIKRMTWKVEGDNGQGPQGLRGGPVNNPNLVVELGPMEIRTFLLKF 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03779 718 Gene3D - 188 308 IPR013780 -
Spst3g03779 718 Gene3D Glycoside hydrolase family 38, central domain 110 165 IPR037094 GO:0004559|GO:0006013
Spst3g03779 718 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 610 715 IPR041147 -
Spst3g03779 718 FunFam Alpha-mannosidase 177 288 - -
Spst3g03779 718 FunFam Alpha-mannosidase 110 165 - -
Spst3g03779 718 Gene3D - 599 718 - -
Spst3g03779 718 Gene3D Glycoside hydrolase 38, N terminal domain 1 30 IPR027291 -
Spst3g03779 718 Pfam Glycosyl hydrolases family 38 C-terminal domain 312 526 IPR011682 GO:0004559|GO:0006013
Spst3g03779 718 Gene3D - 309 576 - -
Spst3g03779 718 FunFam Alpha-mannosidase 29 109 - -
Spst3g03779 718 SUPERFAMILY Glycoside hydrolase/deacetylase 1 63 IPR011330 GO:0005975
Spst3g03779 718 SUPERFAMILY Galactose mutarotase-like 174 718 IPR011013 GO:0003824|GO:0005975|GO:0030246
Spst3g03779 718 SUPERFAMILY Families 57/38 glycoside transferase middle domain 67 165 IPR028995 -
Spst3g03779 718 FunFam Alpha-mannosidase 310 576 - -
Spst3g03779 718 Pfam Alpha mannosidase middle domain 67 159 IPR015341 GO:0004559|GO:0006013
Spst3g03779 718 FunFam Alpha-mannosidase 596 718 - -
Spst3g03779 718 Gene3D Glycoside hydrolase family 38, central domain 31 109 IPR037094 GO:0004559|GO:0006013
Spst3g03779 718 Pfam Glycosyl hydrolases family 38 N-terminal domain 1 62 IPR000602 GO:0004559|GO:0006013
Spst3g03779 718 SMART Alpha_mann_mid_2 67 141 IPR015341 GO:0004559|GO:0006013
Spst3g03779 718 PANTHER ALPHA-MANNOSIDASE 1 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03779 Spst-Chr3 87826077 87831719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03779 1 718 Glycoside Hydrolase AT5G66150 65.541 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03779 K01191 - gmx:100775419 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03779 3 87826077 87831719 Spst3g03779 3 87826077 87831719 ECH
Spst3g03779 3 87826077 87831719 Spst3g03779 3 87826077 87831719 PCT
Spst3g03779 3 87826077 87831719 Spst3g03780 3 87832111 87834466 PCT