Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03463 ATGATGAGACACCGAAGCCATGGTTGGATGCCACCTGTAAACACTGAAAAGACTCAACATTTTGGTGATTTTGTCTTTGAGCTTAAAGCAAAACGGGACCCTGGTTTTTCTGTTTTATTGAAAATCAATATTATTCACAAACTGTGGTCAAATATTTCCATAAATCAGTTAAGGGTCGTAGGACCGAAAACTACCAAAATACCCTTTGGTCGTTGGTTCTTTCTTTTTGCCGTTGGAACTTGGAACACAATACAAAAGGCCTACGGTGCTCTCAAAGACTCCACCAAGGTTGGCCTAGCCAAGGTCAATAGCGAATACAAGGATTTGGACATTGCCATCGTGAAGGCTACCAGTCATGTAGAATATCCTCCTAAGGAACGTCATGTTAGAAAAATATTCTATGCAACTTCAGCACACCAACCACGGGCAGATGTGGCGTACTGCATACATACACTTGCTAGGAGGCTTTCAAAGACACGGAATTGGATAGTTGCTGTAAAGACATTGATAGTCATTCATAGAATACTGAGAGAGGGTGATCCTACTTTCAAAGAAGACCTCATAAACTATGCCCGCAGGGGACGTTTTCTTCAAATATCCAATTTCAAAGATGACTCTAGTCCTCAAGCTTGGGACTGTTCTGCATGGGTTCGAAGCTATGCACTATTTTTAGAAGAAAGGCTTGAATGTTTTAGAGTCCTTAAATATGATATCGAGTCTGAGCGTTTAACAAAATCATCACCCGTTATAACGAAGGGACATGGCAGAACACGGTCCTTGACTAGTGAAGGGCTATTGGAGCAGCTGCCTGCGCTGCAGCAACTTCTATATCGCCTAGTTGGTTGTCAGCCTGAAGGTTCGGCTTTCAACAATTATCTAATACAGTATGCACTGGCCTTGGTATTGAAGGAGAGCTTCAAAATATATTGTACCCTGAATGATGGAATCATAAATCTTGTGGAACTGTTATTTGATATGCCAAAATATGACGCAATCAAGGCGTTGCATATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTGAATTCTATGAATACTGCAAGAGATTGGACCTTGCTAGGAATTTTCAATTTCCAATCTTGAGACAGGAGCATCAAGAAAATGACCGATCACCTCAAAAGGAAGCAGAACCCGAAGTATCTGAAGAGGCTCAAGCAAATGAAAAACCAGATGAAGAAGTCAATGAGGAAGAACCAGTGGACAAAGATGAAACAGAGCCTAAGGAAGAGGAAGCTGAACTTCCTCCTTTGATATCAACTGATACTACTGATGATTTGCTGGGTATAAACGACATAAATCCAAAAGCCCAGGAACTAGAAGAAAGCAATTCTTTAGCGCTAGCAATTGTTCCATCCGGAGGAAATAACTCAAGCAATCTTGCTTTGGCTAACATAAATGGAACGTCTGGTTGGGAACTTGCACTGGTTACAACACCAAGTAACCATTCAGGCCAAGTACCAGATCGCGAAATGGCTGGTGGGTTTGACAAGCTATTACTAGACAGTTTGTATGAAGATGAAAATGCTAGGAGACAGCTTCAAGTCCGTAATGCAGGCTATGGATATGGGGGAATGGATACACATAATCCATTCGATCATCATAATCAACAAGATCCATTTGCAATGTCCAACAACATAGTACCTCCACCCAACGTGCAAATGGCATTCATGTCTCAGCAACATCAACAACAACAAATGATGTTCCACCAACAGCAACAACATAACATGATGATGGTTATTTTGAGTGCTTGGTCAGGATCCAAACTATATACAAACAACATTGAGATGAAAAAACGTGAGAAGAGTTTATCCCAAAACAACCAGTAG 1851 0.4111 MMRHRSHGWMPPVNTEKTQHFGDFVFELKAKRDPGFSVLLKINIIHKLWSNISINQLRVVGPKTTKIPFGRWFFLFAVGTWNTIQKAYGALKDSTKVGLAKVNSEYKDLDIAIVKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLARRLSKTRNWIVAVKTLIVIHRILREGDPTFKEDLINYARRGRFLQISNFKDDSSPQAWDCSAWVRSYALFLEERLECFRVLKYDIESERLTKSSPVITKGHGRTRSLTSEGLLEQLPALQQLLYRLVGCQPEGSAFNNYLIQYALALVLKESFKIYCTLNDGIINLVELLFDMPKYDAIKALHIYKRAGQQAENLAEFYEYCKRLDLARNFQFPILRQEHQENDRSPQKEAEPEVSEEAQANEKPDEEVNEEEPVDKDETEPKEEEAELPPLISTDTTDDLLGINDINPKAQELEESNSLALAIVPSGGNNSSNLALANINGTSGWELALVTTPSNHSGQVPDREMAGGFDKLLLDSLYEDENARRQLQVRNAGYGYGGMDTHNPFDHHNQQDPFAMSNNIVPPPNVQMAFMSQQHQQQQMMFHQQQQHNMMMVILSAWSGSKLYTNNIEMKKREKSLSQNNQ 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03463 616 SUPERFAMILY GAT-like domain 252 371 - -
Spst3g03463 616 Pfam ANTH domain 108 374 IPR011417 GO:0005543
Spst3g03463 616 MobiDBLite consensus disorder prediction 372 396 - -
Spst3g03463 616 CDD ANTH_N 109 231 - -
Spst3g03463 616 SUPERFAMILY ENTH/VHS domain 107 239 IPR008942 -
Spst3g03463 616 Gene3D ANTH domain 251 401 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Spst3g03463 616 MobiDBLite consensus disorder prediction 397 416 - -
Spst3g03463 616 FunFam - 250 325 - -
Spst3g03463 616 ProSiteProfiles ENTH domain profile. 101 238 IPR013809 -
Spst3g03463 616 SMART enth_2 107 238 IPR013809 -
Spst3g03463 616 MobiDBLite consensus disorder prediction 372 434 - -
Spst3g03463 616 PANTHER CLATHRIN ASSEMBLY PROTEIN 85 573 IPR045192 GO:0048268|GO:0072583
Spst3g03463 616 FunFam Clathrin assembly protein AP180 83 238 - -
Spst3g03463 616 Gene3D - 82 238 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03463 Spst-Chr3 84399134 84407770 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03463 K20044 - gmx:100818165 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03463 3 84399134 84407770 Spst3g03463 3 84399134 84407770 ECH
Spst3g03463 3 84399134 84407770 Spst9g02922 9 63332498 63338626 PCT