Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03450 ATGCGCTCAGGAGTTTGTGCATTACAGCAGACCCTCACAGCTGAGGCTGCTTCAGTGTTGAAGCACTCTCTGGGGTTGGCTCGGAGGAGGGGCCATGCACAGGTCACTCCTCTGCATGTGGCTGCCACTTTGCTCAGCCTAAGAGGCAGTTCCTTGAGAAGGGCTTGTCTTAAGTCTCAGCCTCACCAAACTTCTCATCCTCTTCAATGCAGGGCTCTTGAGCTGTGTTTCAATGTGGCTCTCAACAGGCTCCCAACAACACCTGCTACTTTGATCCACTCTCAGCCCTCTCTCTCCAATGCTCTTATTGCTGCATTGAAGAGAGCTCAGGCTCACCAGAGAAGAGGCTGCATAGAGCAACCGCAACAACAGCCTCTTCTCACCATCAAGGTTGAGCTGGAACACCTCATCATATCCATCCTTGATGACCCTAGTGTTAGCCGGGTTATGAGAGAGGCTGGTTTCTCTAGCACTGCTGTTAAGAACAACATAGAGGATTCCTCACCCCACTCTGTTTTCCAGTGCTACAATAGTTCTGGCGGTGTGTTTTCTTCTCCTTGCTCACCTTCTGCCAGTGAGAACCACAGGGAAGCAACCACCAACCCTACCAATTTCAGGCAGACTCATCAGTTCTTAAGTTCTCATGCTTCTGAGTTCCACCCTTCACTTCTCTTTTATCCACTAAAGAATGCACCAGTATGCTCCATCACCGGTGCAGCTTCTTCTAGTAAGGATGACATCAGGGTTCTTCTGGATATATTCTTGGGGAATAAGAAAAAAAACACTGTGATTGTAGGCGACTCTGTGTCATTAACAGAGGGCCTTGTGGGAGAGCTAATTGGAAGGATAGAAAGGTCAGAAGTGCCTGATGAGTTAAAGTCAACCCCTTTTATCAAATTCCAAATTTCACATGTTTCATTGAGTTGCATGAAAAGAGATGAAGTTGAAATGAAAGTCTTGGAACTGAAAAGGAGGGTGGATTCCGTTGCATCAGGAGGAGCGGGTGGCATTTTTTATATTGGAGACCTGAAGTGGACAGTGGAGGAGGCAAGTTTCAGTGACAAACAGGAAGGTTCCCCAGAAGGAGAAGTTTCTGGTTACAATCCAGTTGATCATTTAATTTCAGAAATTAGAAAGTTATTCTGTGACTGTGGAACATCAAATAATGCTAAGATGTGGCTCATGGCCACTGCTAGTTACCAAACATATATGAGGTGTCAAATGAGGCAACCCCCTCTCGAGAAGCAGTGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTTCATGCTCCCAGTGTCCTTGATTCAAAGATGACCATCTCCCAAAACCAATCTCATGTTCCTGAAACAAAGCCCTTTGATAACAAGGAGCGGCAGGATAAGCTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCCCAATTACTTAGGCCAGATGAAAAGAAAATGTTGCCATTCTGGCTTCAGTCTCATAGCACAGAAGACAATAATAAGGATGAATTAGTCCAGCTGAAAAGAAAGTGGAATAGACTTTGTCACTGTCTCCACCAAAACAAACAGCCTCATAACCAATGGAACTGGAACAACAACAGCTATAATTCACCAAGCTCCATATCCTTTGCCAACAATGCCACACATTGTTCCACCTCCAAACTTGTCCCTCGATTCCGGCGCCAACAATCATGCATCATTGAGTTCAATTTCGGCAACAAAAGGGAACCATCAGAGCCGGTCTTAGATTCCCTTGAGGGCATGGAAGACAAAGAAGTAAAGACTACTCTTGCTCTTGGCAATGGCGGTTCAGGTGAGACGGTGGGGGATATAACTGATGATAGCACACTGCAAAGAGCTCATATTTGTAAACTATTGCAGGATAATATCCCATGGCAGTCTGAGACTGTTCCTTCAATAGCAGAAGCCTTGATCGATTCCAAATCAGCAAAGCGAAGTAACAACATTACTTGGTTACTTGTGCAAGGCAATGACAACATTGGGAAAAGAAGGTTGGCACTTGCAGTTGCAGAATCAGTTTTTGGCTCAACTGATGTGCTCCTTCAATTTGATATGTTAAAGAGAAAGACTTCAATAGCCCCATTCTCTGAAATGATAGTAGGAGCACTGAAAACCCACCAACAGCTTGCGGTGCTGATAGAAAATGTTGACTTTGCTGATGCCCAGTTCAAGAAATTCCTCTCAGATGGGTTAGAAACAGGAATGTTTGGAAATTCCACGGAAGAGAACTCAAGCCAAGTAATACTCATATTGACAAGTGGTGGATCCACTAGCATTGAGGAGAAGAATGAGGAATTGGTGATGAAGTTGTTGTGGCAGGTTAGCGAAACCAAGCCTAACTTAGACACTACATCTGTTGCAACTAGGATCACGGCGCCTTGTCTGGGCAACAAAAGAAGAGCTGAACTTGATTTGTTTTCAAACCCCATGAGTTTTCATGGGAGCAAGAAGAAAGTGTTTTCAACACATACAAGCTTTAACACTCTTGATCTGAACATGAAAGCTTATGAAGAATGTGATGGGGAGGGAAAAGCTGGAGAAGGTAGCCCTATTTCAAGTGATTTGACTAGGGAAACTATAGCTGATCCACTGAACCAAAACGGATTTCTTGACTCAATTGAAAACCGGTTTGAGTTCAACACAAGTCCAGTTAAAGACAGAGAGATGGCAGAGTTCTTTTTGTGCAAGATAAAAGGGTCTTTTGAGGAGGTTTGTCGCAAGCAATGTGTGGAGAATTTAACTGTAGATGAGAGGGTGATTGAGAATCTTTGTTTTGGGTGTGGTTATTTTACCAACAAATTGTTTGAGAAATGGCTGAAAATGGTTTTTCAAAGCAGCTTAGAAACGGTTAACTTTGGAGGGAAGGAGGGTATACTTTTTAGACTTTCTTGGGGTGGTAAAGGAGATAGAAAATCAGATAGTGGGTTCATGAGTTCTTCTCTGCCCAAGAGTATCCAAGTTAATTACTTCATAGAGTGA 3015 0.4391 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSQPHQTSHPLQCRALELCFNVALNRLPTTPATLIHSQPSLSNALIAALKRAQAHQRRGCIEQPQQQPLLTIKVELEHLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSPHSVFQCYNSSGGVFSSPCSPSASENHREATTNPTNFRQTHQFLSSHASEFHPSLLFYPLKNAPVCSITGAASSSKDDIRVLLDIFLGNKKKNTVIVGDSVSLTEGLVGELIGRIERSEVPDELKSTPFIKFQISHVSLSCMKRDEVEMKVLELKRRVDSVASGGAGGIFYIGDLKWTVEEASFSDKQEGSPEGEVSGYNPVDHLISEIRKLFCDCGTSNNAKMWLMATASYQTYMRCQMRQPPLEKQWALQAVPVPSGGLGLSLHAPSVLDSKMTISQNQSHVPETKPFDNKERQDKLNCCEECASNYEKEAQLLRPDEKKMLPFWLQSHSTEDNNKDELVQLKRKWNRLCHCLHQNKQPHNQWNWNNNSYNSPSSISFANNATHCSTSKLVPRFRRQQSCIIEFNFGNKREPSEPVLDSLEGMEDKEVKTTLALGNGGSGETVGDITDDSTLQRAHICKLLQDNIPWQSETVPSIAEALIDSKSAKRSNNITWLLVQGNDNIGKRRLALAVAESVFGSTDVLLQFDMLKRKTSIAPFSEMIVGALKTHQQLAVLIENVDFADAQFKKFLSDGLETGMFGNSTEENSSQVILILTSGGSTSIEEKNEELVMKLLWQVSETKPNLDTTSVATRITAPCLGNKRRAELDLFSNPMSFHGSKKKVFSTHTSFNTLDLNMKAYEECDGEGKAGEGSPISSDLTRETIADPLNQNGFLDSIENRFEFNTSPVKDREMAEFFLCKIKGSFEEVCRKQCVENLTVDERVIENLCFGCGYFTNKLFEKWLKMVFQSSLETVNFGGKEGILFRLSWGGKGDRKSDSGFMSSSLPKSIQVNYFIE 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03450 1004 Gene3D - 9 168 IPR036628 -
Spst3g03450 1004 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 970 - -
Spst3g03450 1004 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Spst3g03450 1004 ProSiteProfiles Clp repeat (R) domain profile. 8 170 IPR004176 -
Spst3g03450 1004 Pfam Clp amino terminal domain, pathogenicity island component 26 53 IPR004176 -
Spst3g03450 1004 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Spst3g03450 1004 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Spst3g03450 1004 Gene3D - 597 802 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03450 Spst-Chr3 84316611 84320413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03450 - - gmx:100814376 1657.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03450 3 84316611 84320413 Spst3g03450 3 84316611 84320413 ECH
Spst3g03450 3 84316611 84320413 Spst9g02911 9 63208059 63212201 PCT