Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03237 ATGGGTATAGAAAGCGTTGTGGATGAAAATGCAAGAAAATCATGTGGTGGTCTTCATGATGCTGCTTGTTCTGCGTGTGAGATGGCGGTTGTTTGGATGCAGAGCCAGCTGAGCCGAAATCAGACGCAGGATCAGATACTAAGCTACATCAATCAACTTTGTGATAAAATGCCTAGCCCGATGGGACAATCTTCTGTTGACTGTGGGAATATCTCTTCATTACCTGTTGTGTCCTTTACCATTGGTGGAAGAACTTTTGACCTGCGCCCAGAGGAGTACATACTCAAGGTGCGTGAAGGCCCAGCGGCTCAGTGCATTAGTGGCTTTACTGCTATAGATATTTCACCTCCTCGTGGCCCTCTCTGGATCCTTGGTGACGTCTTTATGGGCCGTTATCACACAGTATTTGATTTTGGTAATCTTAGAGTGGGATTTGCTGAAGCCGCATAA 450 0.4622 MGIESVVDENARKSCGGLHDAACSACEMAVVWMQSQLSRNQTQDQILSYINQLCDKMPSPMGQSSVDCGNISSLPVVSFTIGGRTFDLRPEEYILKVREGPAAQCISGFTAIDISPPRGPLWILGDVFMGRYHTVFDFGNLRVGFAEAA 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03237 149 Pfam Saposin-like type B, region 1 22 58 IPR007856 GO:0006629
Spst3g03237 149 Gene3D - 19 58 - -
Spst3g03237 149 ProSiteProfiles Peptidase family A1 domain profile. 1 146 IPR033121 -
Spst3g03237 149 SUPERFAMILY Acid proteases 32 148 IPR021109 -
Spst3g03237 149 ProSiteProfiles Saposin B type domain profile. 19 60 IPR008139 -
Spst3g03237 149 FunFam Vacuolar aspartic proteinase 15 148 - -
Spst3g03237 149 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 43 147 IPR001461 GO:0004190|GO:0006508
Spst3g03237 149 Gene3D Acid Proteases 59 149 IPR021109 -
Spst3g03237 149 Pfam Eukaryotic aspartyl protease 59 148 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03237 Spst-Chr3 82364522 82365969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03237 K08245 - gmx:547478 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03237 3 82364522 82365969 Spst3g03237 3 82364522 82365969 ECH
Spst6g01206 6 11047765 11051837 Spst3g03237 3 82364522 82365969 ECH