Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03218 TTAAACCCGTTGGTCCCAACTTTGAGGCGTGAATTATACGCGTTTGTTGAAGACGGACGGTTCGAAAGACTAGAAGATAAAGGGGGTCTTCCTCTCTTACCCCCAAGGAACAGGATAGTGGGTGGTGAGGTGAGGAAAAAGAGGAGAGGGAAAATGCATATGAAGAGCAGAGGTGCTGCAGAACTGACTGCAAGGAATGTCCTGCACAGGAAATGGGCTCTTCTGCTTTGCGTGGCAAGCTTCTGTGCTGGAATGTTCTTCACAAATAGGATATGGTCGATGCTTGAATATAAGGAAATTTCAAGGACTACTAGTGAGATTGAAAGAATAAAACTAAACTCTGAGGGTTGTAATCTAAATCTAGTTGCAAGGCCAAACTCAAATTACAGTCAAGTGGAAGTTTTAAATAATCCGAACGCTGTCAAGAATGATGTCAAGAGACCAAGGAAGTCAGAGAAAGTTGAATCAACCACGAGGAAAAAATATTTCATGGTTATAGGGATCAATACAGCTTTCAGTAGCAGGAAGAGAAGAGATTCTGTTCGTACAACTTGGATGCCACAAGCTAACGAAAGAAAGAAGTTGGAGGAAGAAAAAGGCATAATTATACGATTTGTTATAGGTCACAGTTCTACATCTGGTGGCATTCTTGACAAGGCTATTGAAGCAGAGGAGAGGCTTCATGCTGACTTTTTGAGGCTGAACCACGTTGAGGGATACCTAGAACTATCAGCTAAGACAAAGACCTACTTTTCAACTGCTGTTGCCTTGTGGGATGCAGAATTTTATGTCAAAGTTGATGATGATGTTCATGTCAATTTAGCAACGCTTGGATTGACTTTGAGTATGCACCGTATGAAAACTCGGGTGTATATTGGATGCATGAAATCCGGTCCTGTCCTTGCTCAGAAGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGAGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAATTATATGCCATTTCGCAAGATTTGGCTACTTATATATCAATAAATCAGGATATGCTGCATAAATATGCCAACGAAGATGTTTCATTGGGATCTTGGTTTATTGGTTTAGACGTGGATCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAGGCGCAGGCTGGCAACATCTGCGTTGCTTCGTTTGATTGGAAATGCAGTGGAATCTGCAGGTCTGTTGAGAGGATGAAAGAAGTTCACCTGCGTTGTGGGGAGGATGAAAACGCTTTGTGGAGTGCAAGTGCAACCTTCTAA 1302 0.427 LNPLVPTLRRELYAFVEDGRFERLEDKGGLPLLPPRNRIVGGEVRKKRRGKMHMKSRGAAELTARNVLHRKWALLLCVASFCAGMFFTNRIWSMLEYKEISRTTSEIERIKLNSEGCNLNLVARPNSNYSQVEVLNNPNAVKNDVKRPRKSEKVESTTRKKYFMVIGINTAFSSRKRRDSVRTTWMPQANERKKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEERLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGLTLSMHRMKTRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISINQDMLHKYANEDVSLGSWFIGLDVDHVDDRRMCCGTPPDCEWKAQAGNICVASFDWKCSGICRSVERMKEVHLRCGEDENALWSASATF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03218 433 Gene3D - 151 376 - -
Spst3g03218 433 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 140 372 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst3g03218 433 Pfam Domain of unknown function (DUF4094) 69 142 IPR025298 -
Spst3g03218 433 Pfam Galactosyltransferase 176 373 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst3g03218 433 FunFam Hexosyltransferase 156 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03218 Spst-Chr3 82188773 82196404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g03218 54 430 Glycosyltransferase AT1G05170 63.592 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g03218 K20855 - gmx:100810168 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g03218 3 82188773 82196404 Spst3g03218 3 82188773 82196404 ECH
Spst5g00734 5 6389949 6393400 Spst3g03218 3 82188773 82196404 ECH
Spst11g01107 11 35422779 35426434 Spst3g03218 3 82188773 82196404 ECH